FFCP PHASE1:Hg19::chr1:9749640..9749651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:9749640..9749651,+ | |||
|description=CAGE_peak_at_chr1:9749640..9749651,+ | |description=CAGE_peak_at_chr1:9749640..9749651,+ | ||
|id=chr1:9749640..9749651,+ | |id=chr1:9749640..9749651,+ | ||
|ontology_enrichment_celltype=CL:0002077!9.56e-13!33;CL:0002321!1.31e-11!248;CL:0000221!3.33e-11!71;CL:0000220!4.76e-11!246;CL:0000055!8.30e-11!180;CL:0000144!2.20e-10!625;CL:0000075!8.49e-10!27;CL:0000710!5.66e-09!20;CL:0002371!8.47e-08!591;CL:0000548!1.79e-07!679;CL:0000004!1.79e-07!679;CL:0000255!1.79e-07!679;CL:0000012!1.83e-07!682;CL:0000133!6.84e-07!59 | |ontology_enrichment_celltype=CL:0002077!9.56e-13!33;CL:0002321!1.31e-11!248;CL:0000221!3.33e-11!71;CL:0000220!4.76e-11!246;CL:0000055!8.30e-11!180;CL:0000144!2.20e-10!625;CL:0000075!8.49e-10!27;CL:0000710!5.66e-09!20;CL:0002371!8.47e-08!591;CL:0000548!1.79e-07!679;CL:0000004!1.79e-07!679;CL:0000255!1.79e-07!679;CL:0000012!1.83e-07!682;CL:0000133!6.84e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.01e-18;10!CL:0000075;6.44e-17;27!CL:0000710;1.30e-16;20!CL:0002077;5.50e-14;34!CL:0000147;1.69e-12;14!CL:0002567;1.75e-12;3!CL:0000346;1.96e-12;3!CL:1000428;1.96e-12;3!CL:0002559;1.34e-07;5!CL:0000097;5.60e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.65e-18,10;CL:0000541,5.65e-18,10;CL:0000075,5.64e-17,27;CL:0000710,9.40e-17,20;CL:0002077,3.38e-15,34;CL:0000221,4.54e-13,72;CL:0000147,1.62e-12,14;CL:0002567,1.79e-12,3;CL:0000346,1.92e-12,3;CL:1000428,1.92e-12,3;CL:0000133,1.12e-11,59;CL:0000333,4.74e-10,41;CL:0002559,1.32e-07,5;CL:0000097,6.59e-07,5;CL:0002028,6.59e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000221;2.40e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.96e-12;3!UBERON:0001992;1.96e-12;3!UBERON:0002119;2.36e-08;4!UBERON:0001003;3.08e-08;15!UBERON:0007376;3.08e-08;15!UBERON:0002073;1.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.92e-12,3;UBERON:0001992,1.92e-12,3;UBERON:0002119,2.78e-08,4;UBERON:0001003,3.60e-08,15;UBERON:0007376,3.60e-08,15;UBERON:0007383,3.60e-08,15;UBERON:0002073,1.32e-07,5;UBERON:0005086,1.32e-07,5 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.247532705920093,0,0,0.602694528023977,0,0,0,1.63200552995402,0.313454721478088,0.572471974262113,0.958120975510189,0.502170558379211,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0.726991193897824,1.88937971844405,0.485168122375632,1.39457422143411,0.411167888021826,0.619412741790207,0,0,0,0.344745680736619,0,0,1.31769637679823,1.36453075028923,0.449446968890169,1.22433556948361,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,0.651844533267181,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.986627427622057,0.552700035571697,0.289803085735052,0.593146252648242,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0,0.263504357079378,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.926864265692532,0,0,0.560677600142307,1.06748995729705,0.98667019366864,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,1.35117749042945,0.309977343527296,0,0.989067717114227,0,0,0.505008341862199,0.750711119231785,0,0,0.30648779579902,1.95309476578576,0.113432183160021,0.358779271377724,1.49490172172997,0.211931901159562,0,0.206105058476878,0,0.558350568994769,0,0,0,0.736399189138395,0.161646056818812,0,0.10075209822764,0.169560592310488,1.15956511897978,0.272746120590835,0.573609190778008,0.731842236777572,0.530119073285941,0.348581828608555,0.207322110030741,0,0.72995471815166,4.69348596989448,3.85944562915731,4.14404764057442,0.928735856063958,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,1.20725313949488,1.1240175325762,0.804231779293047,0.277765335475589,0.325808305310325,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.283550194484773,0.179117045405697,0.871901815541886,2.68367875415648,0,0.088048434013226,1.24396869324463,1.29707958075265,2.27236380167484,2.34942208881025,4.58386110669933,3.51652341630141,5.13217338068116,1.43958489784653,3.30377363628309,4.0015700568281,0.336393253036082,0,0.22001485746285,0.517086863031111,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0.823240336780769,0,0.710783897485092,0,0.904318131178758,0.871533458600294,1.79951384127703,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0.112085143993527,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,0.542530047399471,0.831883446123229,1.24900292158013,1.41932173530541,1.7571212248907,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0.686286847621712,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.771048469013278,0.532685175939381,0.164254312027618,1.03850885836724,0.116210378459959,0,1.00253235151642,0.368323955743585,0.114814448164607,0.364182336013434,0.131124414959424,0,0.847168708148562,4.70609861506113,0,0.422206515571503,1.13733384070897,0.340187410553031,0.431831832204279,0,1.08378575017541,0,0.254876273045038,0.831076008928724,1.34324852833307,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.366277859273374,0.165018999841176,1.72279661398852,0.650060246036521,0,0.773365746336976,0.154048617114644,0,0.413509717453592,0,0,0.340906509664404,0.267096106940212,0.330569830721956,0.192190067365106,0.893288987462089,0.4046311234222,0,0.31481234683064,0,0,0,2.60979897622522,1.29726953372744,0.572499546967965,0.372158369359667,0,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0,0.353437207037059,1.2130948894399,0,1.68503382495592,0.48763373908959,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,1.12678241012897,0.286822704408103,0.196498082026242,0.35667105148125,0.354761064070598,0,0,0,0,0.673554789078584,0,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0,0,0,0,1.8922479853894,0,0,0.199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| ||
|short_description=p@chr1:9749640..9749651,+ | |short_description=p@chr1:9749640..9749651,+ | ||
}} | }} |
Latest revision as of 11:39, 28 July 2015
Short description: | p@chr1:9749640..9749651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:9749640..9749651, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.65e-18 | 10 |
melanoblast | 5.65e-18 | 10 |
columnar/cuboidal epithelial cell | 5.64e-17 | 27 |
neurecto-epithelial cell | 9.40e-17 | 20 |
ecto-epithelial cell | 3.38e-15 | 34 |
ectodermal cell | 4.54e-13 | 72 |
pigment cell | 1.62e-12 | 14 |
light melanocyte | 1.79e-12 | 3 |
hair follicle dermal papilla cell | 1.92e-12 | 3 |
stem cell of epidermis | 1.92e-12 | 3 |
neurectodermal cell | 1.12e-11 | 59 |
migratory neural crest cell | 4.74e-10 | 41 |
hair follicle cell | 1.32e-07 | 5 |
mast cell | 6.59e-07 | 5 |
basophil mast progenitor cell | 6.59e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.92e-12 | 3 |
papillary layer of dermis | 1.92e-12 | 3 |
left ovary | 2.78e-08 | 4 |
skin epidermis | 3.60e-08 | 15 |
outer epithelium | 3.60e-08 | 15 |
enveloping layer of ectoderm | 3.60e-08 | 15 |
hair follicle | 1.32e-07 | 5 |
hair follicle placode | 1.32e-07 | 5 |