FFCP PHASE1:Hg19::chr20:39833181..39833189,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=367bp_to_CU686675_5end | |||
|description=CAGE_peak_1_at_CU686675_5end | |||
|id=chr20:39833181..39833189,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;4.54e-13;3!CL:1000428;4.54e-13;3!CL:0002174;1.98e-10;1!CL:0002581;1.98e-10;1!CL:0002616;1.98e-10;1!CL:0000501;1.98e-10;1!CL:0002559;3.39e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.81e-13,3;CL:1000428,5.81e-13,3;CL:0002616,1.19e-10,1;CL:0002581,1.73e-10,1;CL:0002174,2.74e-10,1;CL:0000501,2.74e-10,1;CL:0002559,3.92e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.98e-10;1!UBERON:0004874;1.98e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-09!115;UBERON:0000033!1.75e-07!123;UBERON:0000955!2.24e-07!69;UBERON:0006238!2.24e-07!69;UBERON:0000153!2.34e-07!129;UBERON:0007811!2.34e-07!129;UBERON:0001049!4.88e-07!57;UBERON:0005068!4.88e-07!57;UBERON:0006241!4.88e-07!57;UBERON:0007135!4.88e-07!57;UBERON:0000475!7.56e-07!365;UBERON:0002616!8.27e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;4.11e-19;2!UBERON:0000412;4.54e-13;3!UBERON:0001992;4.54e-13;3!UBERON:0002084;1.98e-10;1!UBERON:0000989;1.98e-10;1!UBERON:0008811;1.98e-10;1!UBERON:0002082;1.98e-10;1!UBERON:0002073;3.39e-08;5!UBERON:0000200;4.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.17e-19,2;UBERON:0000412,5.81e-13,3;UBERON:0001992,5.81e-13,3;UBERON:0000989,1.57e-10,1;UBERON:0008811,1.57e-10,1;UBERON:0006258,1.57e-10,1;UBERON:0005876,1.57e-10,1;UBERON:0004874,1.57e-10,1;UBERON:0002084,2.28e-10,1;UBERON:0002082,2.28e-10,1;UBERON:0010226,2.28e-10,1;UBERON:0002073,3.92e-08,5;UBERON:0005086,3.92e-08,5;UBERON:0000200,3.34e-07,6 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0.263766978228454,0.495065411840187,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0.523916301990851,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0,0,0.269421344139376,0.817309515567294,0,0,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.161872944368132,0.561803226808994,0.408308342509787,0.245668634623536,0.206651562351531,1.18800285728205,0,0,0,0,0.250237039743928,0,0.438977620880838,0.919463387397059,0.150238058906597,0.226864366320042,0,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0.744467425326359,0,0.194874010322397,0.504867548488229,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.928735856063958,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,1.08506009479894,0.623912584592421,1.96271887676878,0.473107245101804,0.35142424497814,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,0,0.965123526861645,1.48418066444991,0.616838775210622,0,0,1.55776328755086,0.348631135379878,0,0.40101294060657,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.457847324091717,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.429680979473094,0.435050081742686,0.0852266274161009,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0.649243880549111,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0,0,0,0,0.520874984799877,0,0.361789315876224,0,1.3269511191747,0.591095237907095,0.219385397153973,0,0.139423744278603,0.384751292518985,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0.337005664903385,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0.146178634172371,0,0.0969890164884194,0,0,0.137041924646751,0,0.253243183823515,0,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0,1.20116498503375,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,1.28929632425987,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0.157566364614447,0.0824158583811665,0,0,0,0,0.817220436669454,0,0.137539436597234,0,0,0,0.425246896606173,0,0.394028536495991,0.209818352539992,0,0,0,0,1.32418394073086,0,0,1.72844298240254,0.979762080328227,0,0,0.340776043570843,0.113312091520126,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,3.90484047686282,0.250381861413,0,0.665574309221114,0.434674820589684,0.276697269872462,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.318593534327405,0,0.310525913752519,0.829412415681711,0,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0.107410557042488,0,0.796191777397232,0.800055529326307,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0.537266523244462,0,0.438568099157414,0.530067437837643,0,0.168942440653073,0,0,0,0.967809053062115,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0.3062454773532,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.414943514785307,0.484426936895553,0,0,0,0.550285795565037,0,0,0,0,0,0.60511520611056,0,0,0.818859587550484,0,0.202612753855184,0,0.826747186004736,0.19024743058172,0,0,1.48863353516788,0,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0.460409414939944,0.236387681767936,0.111231401892069,0.078493092850514,0.471346769748006,0,0,0.431855182437243,0,0.357382720883282,0.158013611732727,0,0,0.801711364730253,0.207216164163037,0.6828739083758,0.691259661814092,0,0.354996002191696,0.170426809518315,0,0,0,0,0.223710863595585,0,0.121917924982269,0.647428837187895,0.102662806856247,0,0,0.467878926924211,0.397901550322736,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.785233868459781,0,0,0,0,0,0,0,0.352894871715692,0.160482733378337,0,0,0.716697915757256,0.157771562193185,0.407948941145488,0,0.5290268405154,1.85997509083376,0.462175628631418,0,0.252332849670158,0.109265571963696,0,0.203977659483963,0,0,0.250707539292375,0.530450887527676,0.803892390468535,0,0.517164979309476,0,0,0.129177819672012,0.124149428591716,0.224263725161227,0.0636471582781649,0,0.435433495793923,0.342233301085281,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p1@CU686675 | |||
}} |
Revision as of 11:15, 21 January 2014
Short description: | p1@CU686675 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CU686675_5end |
Coexpression cluster: | NA |
Association with transcript: | 367bp_to_CU686675_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.81e-13 | 3 |
stem cell of epidermis | 5.81e-13 | 3 |
perirenal adipocyte cell | 1.19e-10 | 1 |
perirenal preadipocyte | 1.73e-10 | 1 |
follicular cell of ovary | 2.74e-10 | 1 |
granulosa cell | 2.74e-10 | 1 |
hair follicle cell | 3.92e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.17e-19 | 2 |
dermal papilla | 5.81e-13 | 3 |
papillary layer of dermis | 5.81e-13 | 3 |
penis | 1.57e-10 | 1 |
intromittent organ | 1.57e-10 | 1 |
lateral plate mesenchyme | 1.57e-10 | 1 |
undifferentiated genital tubercle | 1.57e-10 | 1 |
somatopleure | 1.57e-10 | 1 |
heart left ventricle | 2.28e-10 | 1 |
cardiac ventricle | 2.28e-10 | 1 |
future cardiac ventricle | 2.28e-10 | 1 |
hair follicle | 3.92e-08 | 5 |
hair follicle placode | 3.92e-08 | 5 |
gyrus | 3.34e-07 | 6 |