FFCP PHASE1:Hg19::chr22:44319635..44319646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80339 | |EntrezGene=80339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18590 | |HGNC=18590 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NST1 | |UniProt=Q9NST1 | ||
|association_with_transcript=16bp_to_ENST00000216180,NM_025225,uc003bei.1,uc010gzm.1_5end | |association_with_transcript=16bp_to_ENST00000216180,NM_025225,uc003bei.1,uc010gzm.1_5end | ||
|cluster_id=chr22:44319635..44319646,+ | |||
|description=CAGE_peak_2_at_PNPLA3_5end | |description=CAGE_peak_2_at_PNPLA3_5end | ||
|id=chr22:44319635..44319646,+ | |id=chr22:44319635..44319646,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.26e-11!180;CL:0000133!1.02e-08!59;CL:0002620!3.67e-08!23;CL:1000507!3.70e-08!12;CL:1000494!3.70e-08!12;CL:0000221!4.26e-08!71;CL:1000449!1.20e-07!16;CL:0002321!2.62e-07!248;CL:0000220!2.99e-07!246;CL:0000333!3.19e-07!41;CL:1000497!3.44e-07!18;CL:0002518!3.44e-07!18 | |ontology_enrichment_celltype=CL:0000055!2.26e-11!180;CL:0000133!1.02e-08!59;CL:0002620!3.67e-08!23;CL:1000507!3.70e-08!12;CL:1000494!3.70e-08!12;CL:0000221!4.26e-08!71;CL:1000449!1.20e-07!16;CL:0002321!2.62e-07!248;CL:0000220!2.99e-07!246;CL:0000333!3.19e-07!41;CL:1000497!3.44e-07!18;CL:0002518!3.44e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.44e-07;15!CL:0002556;2.02e-07;6!CL:0002567;2.28e-07;3!CL:0000346;4.78e-07;3!CL:1000428;4.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.46e-07,15;CL:0002556,2.22e-07,6;CL:0000346,2.37e-07,3;CL:1000428,2.37e-07,3;CL:0002567,2.52e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.78e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.11e-17!365;UBERON:0000481!9.58e-12!347;UBERON:0000924!2.78e-11!173;UBERON:0006601!2.78e-11!173;UBERON:0004121!7.84e-11!169;UBERON:0000468!1.27e-09!659;UBERON:0000033!1.80e-09!123;UBERON:0000119!3.75e-09!312;UBERON:0000483!6.05e-09!309;UBERON:0000064!1.27e-08!219;UBERON:0000467!1.85e-08!625;UBERON:0000480!2.54e-08!626;UBERON:0000153!3.06e-08!129;UBERON:0007811!3.06e-08!129;UBERON:0009773!3.70e-08!12;UBERON:0001231!3.70e-08!12;UBERON:0004810!3.70e-08!12;UBERON:0002097!3.74e-08!40;UBERON:0002199!8.19e-08!45;UBERON:0002416!8.19e-08!45;UBERON:0000073!9.68e-08!94;UBERON:0001016!9.68e-08!94;UBERON:0004211!1.20e-07!16;UBERON:0001285!1.20e-07!16;UBERON:0007684!1.20e-07!16;UBERON:0003220!1.20e-07!16;UBERON:0004208!1.20e-07!16;UBERON:0006555!1.30e-07!17;UBERON:0005103!1.30e-07!17;UBERON:0000083!1.30e-07!17;UBERON:0009201!1.30e-07!17;UBERON:0004819!1.30e-07!17;UBERON:0006553!1.30e-07!17;UBERON:0003074!1.30e-07!17;UBERON:0003060!1.30e-07!17;UBERON:0003102!1.41e-07!95;UBERON:0005743!4.50e-07!86;UBERON:0005256!5.72e-07!143;UBERON:0000062!6.62e-07!511;UBERON:0001444!7.49e-07!48;UBERON:0000080!7.58e-07!18;UBERON:0002120!7.58e-07!18;UBERON:0004875!7.58e-07!18;UBERON:0005721!7.58e-07!18;UBERON:0005754!7.58e-07!18;UBERON:0007297!7.58e-07!18;UBERON:0001456!9.42e-07!21 | |ontology_enrichment_uberon=UBERON:0000475!1.11e-17!365;UBERON:0000481!9.58e-12!347;UBERON:0000924!2.78e-11!173;UBERON:0006601!2.78e-11!173;UBERON:0004121!7.84e-11!169;UBERON:0000468!1.27e-09!659;UBERON:0000033!1.80e-09!123;UBERON:0000119!3.75e-09!312;UBERON:0000483!6.05e-09!309;UBERON:0000064!1.27e-08!219;UBERON:0000467!1.85e-08!625;UBERON:0000480!2.54e-08!626;UBERON:0000153!3.06e-08!129;UBERON:0007811!3.06e-08!129;UBERON:0009773!3.70e-08!12;UBERON:0001231!3.70e-08!12;UBERON:0004810!3.70e-08!12;UBERON:0002097!3.74e-08!40;UBERON:0002199!8.19e-08!45;UBERON:0002416!8.19e-08!45;UBERON:0000073!9.68e-08!94;UBERON:0001016!9.68e-08!94;UBERON:0004211!1.20e-07!16;UBERON:0001285!1.20e-07!16;UBERON:0007684!1.20e-07!16;UBERON:0003220!1.20e-07!16;UBERON:0004208!1.20e-07!16;UBERON:0006555!1.30e-07!17;UBERON:0005103!1.30e-07!17;UBERON:0000083!1.30e-07!17;UBERON:0009201!1.30e-07!17;UBERON:0004819!1.30e-07!17;UBERON:0006553!1.30e-07!17;UBERON:0003074!1.30e-07!17;UBERON:0003060!1.30e-07!17;UBERON:0003102!1.41e-07!95;UBERON:0005743!4.50e-07!86;UBERON:0005256!5.72e-07!143;UBERON:0000062!6.62e-07!511;UBERON:0001444!7.49e-07!48;UBERON:0000080!7.58e-07!18;UBERON:0002120!7.58e-07!18;UBERON:0004875!7.58e-07!18;UBERON:0005721!7.58e-07!18;UBERON:0005754!7.58e-07!18;UBERON:0007297!7.58e-07!18;UBERON:0001456!9.42e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;8.01e-09;5!UBERON:0005388;8.01e-09;5!UBERON:0001802;8.01e-09;5!UBERON:0006555;1.44e-07;15!UBERON:0004819;1.44e-07;15!UBERON:0001285;1.44e-07;15!UBERON:0007684;1.44e-07;15!UBERON:0001758;2.02e-07;6!UBERON:0003672;2.02e-07;6!UBERON:0000412;4.78e-07;3!UBERON:0001992;4.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.06e-07,6;UBERON:0005388,1.06e-07,6;UBERON:0001802,1.06e-07,6;UBERON:0004211,1.46e-07,15;UBERON:0009773,1.46e-07,15;UBERON:0001231,1.46e-07,15;UBERON:0001285,1.46e-07,15;UBERON:0007684,1.46e-07,15;UBERON:0004208,1.46e-07,15;UBERON:0001758,2.22e-07,6;UBERON:0003672,2.22e-07,6;UBERON:0000412,2.37e-07,3;UBERON:0001992,2.37e-07,3;UBERON:0006555,4.54e-07,16;UBERON:0004819,4.54e-07,16 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0.783556884599516,0,1.39560233594486,0.218441372130172,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0.738726348460727,1.42800483870977,0.313454721478088,0.85870796139317,0.821246550437305,0.753255837568817,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.661743720148475,0.886917589850256,1.05401742831751,0.196468613246569,0.364295288292542,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,0,1.13061588384802,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0,0.563057402416611,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.860509862246441,0.709336764396714,0,1.06748995729705,0.24666754841716,0.622422070799533,0.269421344139376,0,0.605429710579726,0,0,0.312160076830321,0.570471821544449,0.747243402759005,0.939475989150119,0.161872944368132,0.98315564691574,0.61246251376468,0.859840221182376,0.206651562351531,0,0.989067717114227,0,0,1.5150250255866,1.00094815897571,0.277064115484183,0,1.22595118319608,0.45071417671979,0,0.358779271377724,0.213557388818567,0.423863802319124,1.20036438433761,0.103052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.0974370051611986,1.00973509697646,0.276149695926898,0.161646056818812,0.710019185033229,0.302256294682921,0.169560592310488,0.386521706326594,0,0.860413786167011,0,0.530119073285941,0,0.10366105501537,0.504641701751257,1.09493207722749,1.56449532329816,0,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0.8231480226628,0,2.53510069643662,0,1.77236972004421,0,0.614942192715568,0.171567810298526,0.329250856225877,0,0.301586917234893,0,0.651616610620649,0,0,0.463721619900307,0.352226082707465,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0.63497894292169,1.14596527667483,0,3.4214489204541,0.205654985406647,0,0.857479297891735,0.112131084345361,1.30788020649984,0,0.775630294546667,0,0,0,2.08014873822732,1.28603687131071,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0.502548796003046,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,1.56640925970192,0.686286847621712,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0.241718899183244,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.262248829918848,0.451199612907412,0.462092022626489,0.784349769176855,1.46139224653261,0.73886140225013,1.13733384070897,0.510281115829547,0,0,0.541892875087706,2.00675909541941,1.01950509218015,0.831076008928724,0.447749509444357,0,0,1.53870075069834,0.328014645699706,0.325378394664303,0.206082023295445,0.640986253728404,0.577566499444116,0.574265537996172,0,0,0.193341436584244,0.616194468458578,0.460511024178389,0.413509717453592,0.537101224341368,0.870100163485371,0.426133137080504,0.623224249527161,0,0,1.02090169995667,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0.255897791311334,1.28381696410176,0.318203247925937,0,0,1.37268514868027,0.824686816419805,0.202182481573316,0,0.842516912477962,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0,0.35667105148125,0.354761064070598,0,0,0.379473173765715,1.04980416073495,0.288666338176536,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.667396566847634,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0.728163130497081,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.422250816255987,0,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0.511572370226872,0,0,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0.262379999988587,0,0.568967241427498,0,0,0.689486746482929,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0.835375596043643,0.067401132980677,0,0,0,0,0.242780379534093,0,0,1.22429104652196,0.063186579628488,0,0.103688191397247,0,0,0.313932918407225,1.19472429772959,0,0.4160240190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| ||
|short_description=p2@PNPLA3 | |short_description=p2@PNPLA3 | ||
}} | }} |
Latest revision as of 01:51, 25 September 2015
Short description: | p2@PNPLA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PNPLA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000216180, NM_025225, uc003bei.1, uc010gzm.1_5end |
EntrezGene: | PNPLA3 |
HGNC: | 18590 |
UniProt: | Q9NST1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.46e-07 | 15 |
fibroblast of periodontium | 2.22e-07 | 6 |
hair follicle dermal papilla cell | 2.37e-07 | 3 |
stem cell of epidermis | 2.37e-07 | 3 |
light melanocyte | 2.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
retina | 1.06e-07 | 6 |
photoreceptor array | 1.06e-07 | 6 |
posterior segment of eyeball | 1.06e-07 | 6 |
nephron epithelium | 1.46e-07 | 15 |
renal tubule | 1.46e-07 | 15 |
nephron tubule | 1.46e-07 | 15 |
nephron | 1.46e-07 | 15 |
uriniferous tubule | 1.46e-07 | 15 |
nephrogenic mesenchyme | 1.46e-07 | 15 |
periodontium | 2.22e-07 | 6 |
dentition | 2.22e-07 | 6 |
dermal papilla | 2.37e-07 | 3 |
papillary layer of dermis | 2.37e-07 | 3 |
excretory tube | 4.54e-07 | 16 |
kidney epithelium | 4.54e-07 | 16 |