FFCP PHASE1:Hg19::chr2:151395527..151395573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390 | |EntrezGene=390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=671 | |HGNC=671 | ||
|TSSclassifier=strong | |||
|UniProt=Q53RZ3 | |UniProt=Q53RZ3 | ||
|association_with_transcript=-2bp_to_ENST00000439275_5end | |association_with_transcript=-2bp_to_ENST00000439275_5end | ||
|cluster_id=chr2:151395527..151395573,- | |||
|description=CAGE_peak_7_at_RND3_5end | |description=CAGE_peak_7_at_RND3_5end | ||
|id=chr2:151395527..151395573,- | |id=chr2:151395527..151395573,- | ||
|ontology_enrichment_celltype=CL:0000710!5.77e-10!20;CL:0002556!1.45e-08!6;CL:0000148!2.25e-08!10;CL:0000541!2.25e-08!10;CL:0000057!2.80e-08!75;CL:0002552!5.79e-07!5;CL:0000075!9.15e-07!27 | |ontology_enrichment_celltype=CL:0000710!5.77e-10!20;CL:0002556!1.45e-08!6;CL:0000148!2.25e-08!10;CL:0000541!2.25e-08!10;CL:0000057!2.80e-08!75;CL:0002552!5.79e-07!5;CL:0000075!9.15e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000710;1.70e-37;20!CL:0000148;1.58e-34;10!CL:0000075;1.73e-27;27!CL:0000147;1.41e-24;14!CL:0002077;1.33e-19;34!CL:0000197;1.27e-14;6!CL:0000098;1.27e-14;6!CL:0002167;1.27e-14;6!CL:0002567;1.06e-13;3!CL:0002566;2.66e-11;1!CL:0000222;1.05e-10;1!CL:0002591;1.05e-10;1!CL:0002537;1.40e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,1.26e-37,20;CL:0000148,1.37e-34,10;CL:0000541,1.37e-34,10;CL:0000075,1.39e-27,27;CL:0000147,1.28e-24,14;CL:0002077,1.15e-21,34;CL:0000197,1.03e-14,6;CL:0000098,1.03e-14,6;CL:0002167,1.03e-14,6;CL:0002567,8.44e-14,3;CL:0000133,1.53e-11,59;CL:0002566,2.53e-11,1;CL:0002591,1.21e-10,1;CL:0000221,2.70e-09,72;CL:0002537,1.37e-08,5;CL:0000333,9.96e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.21e-10!5;DOID:450!3.21e-10!5;DOID:66!3.21e-10!5;DOID:423!3.21e-10!5;DOID:0080000!3.21e-10!5;DOID:11722!3.21e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:3112;4.14e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.15e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.82e-09!95;UBERON:0001758!1.45e-08!6;UBERON:0003672!1.45e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.14e-09;10!UBERON:0000158;4.14e-09;10 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@RND3 | |short_description=p7@RND3 | ||
}} | }} |
Latest revision as of 11:21, 17 September 2015
Short description: | p7@RND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RND3_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000439275_5end |
EntrezGene: | RND3 |
HGNC: | 671 |
UniProt: | Q53RZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 1.26e-37 | 20 |
melanocyte | 1.37e-34 | 10 |
melanoblast | 1.37e-34 | 10 |
columnar/cuboidal epithelial cell | 1.39e-27 | 27 |
pigment cell | 1.28e-24 | 14 |
ecto-epithelial cell | 1.15e-21 | 34 |
receptor cell | 1.03e-14 | 6 |
sensory epithelial cell | 1.03e-14 | 6 |
olfactory epithelial cell | 1.03e-14 | 6 |
light melanocyte | 8.44e-14 | 3 |
neurectodermal cell | 1.53e-11 | 59 |
dark melanocyte | 2.53e-11 | 1 |
smooth muscle cell of the pulmonary artery | 1.21e-10 | 1 |
ectodermal cell | 2.70e-09 | 72 |
amnion mesenchymal stem cell | 1.37e-08 | 5 |
migratory neural crest cell | 9.96e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.15e-11 | 1 |