Difference between revisions of "FFCP PHASE1:Hg19::chr2:177000805..177000830,+"
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
+ | |DHSsupport=supported | ||
+ | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
+ | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=NA | |HGNC=NA | ||
+ | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
+ | |cluster_id=chr2:177000805..177000830,+ | ||
|description=CAGE_peak_at_chr2:177000805..177000830,+ | |description=CAGE_peak_at_chr2:177000805..177000830,+ | ||
|id=chr2:177000805..177000830,+ | |id=chr2:177000805..177000830,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.56e-10!23 | |ontology_enrichment_celltype=CL:0002620!1.56e-10!23 | ||
+ | |ontology_enrichment_celltype_v019=CL:0002620;7.13e-14;23!CL:0002559;7.90e-10;5!CL:0000346;1.67e-09;3!CL:1000428;1.67e-09;3!CL:0002618;4.42e-09;3!CL:0002139;2.56e-08;24!CL:0002543;1.02e-07;6 | ||
+ | |ontology_enrichment_celltype_v019_2=CL:0002620,5.66e-14,23;CL:0002559,6.01e-10,5;CL:0000346,1.06e-09,3;CL:1000428,1.06e-09,3;CL:0002618,4.33e-09,3;CL:0002139,2.00e-08,24;CL:0002543,8.39e-08,6 | ||
+ | |ontology_enrichment_development_v019=UBERON:0007297;7.56e-08;2 | ||
|ontology_enrichment_disease=DOID:2394!8.48e-08!14 | |ontology_enrichment_disease=DOID:2394!8.48e-08!14 | ||
+ | |ontology_enrichment_disease_v019=DOID:171;1.96e-07;10!DOID:2394;3.87e-07;14 | ||
+ | |ontology_enrichment_disease_v019_2=DOID:171,2.60e-07,10;DOID:2394,3.86e-07,14 | ||
|ontology_enrichment_uberon=UBERON:0002097!4.35e-11!40;UBERON:0002199!1.36e-10!45;UBERON:0002416!1.36e-10!45;UBERON:0003133!1.74e-09!48;UBERON:0005156!5.02e-08!59;UBERON:0000990!5.02e-08!59;UBERON:0003886!3.23e-07!63 | |ontology_enrichment_uberon=UBERON:0002097!4.35e-11!40;UBERON:0002199!1.36e-10!45;UBERON:0002416!1.36e-10!45;UBERON:0003133!1.74e-09!48;UBERON:0005156!5.02e-08!59;UBERON:0000990!5.02e-08!59;UBERON:0003886!3.23e-07!63 | ||
+ | |ontology_enrichment_uberon_v019=UBERON:0005904;7.44e-14;4!UBERON:0002097;1.29e-11;41!UBERON:0006947;5.75e-11;3!UBERON:0004054;5.75e-11;3!UBERON:0002073;7.90e-10;5!UBERON:0000412;1.67e-09;3!UBERON:0001992;1.67e-09;3!UBERON:0002199;1.27e-08;46!UBERON:0002416;1.27e-08;46!UBERON:0003102;5.40e-08;50!UBERON:0002067;7.20e-08;9 | ||
+ | |ontology_enrichment_uberon_v019_2=UBERON:0002097,2.94e-15,41;UBERON:0005904,7.89e-14,4;UBERON:0002199,3.67e-13,46;UBERON:0002416,3.67e-13,46;UBERON:0006947,5.80e-11,3;UBERON:0004054,5.80e-11,3;UBERON:0002073,6.01e-10,5;UBERON:0005086,6.01e-10,5;UBERON:0000412,1.06e-09,3;UBERON:0001992,1.06e-09,3;UBERON:0002067,4.32e-08,9;UBERON:0004016,4.32e-08,9;UBERON:0010083,4.32e-08,9;UBERON:0003133,8.43e-07,48 | ||
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| ||
|short_description=p@chr2:177000805..177000830,+ | |short_description=p@chr2:177000805..177000830,+ | ||
}} | }} |
Latest revision as of 17:47, 28 July 2015
Short description: | p@chr2:177000805..177000830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:177000805..177000830, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.66e-14 | 23 |
hair follicle cell | 6.01e-10 | 5 |
hair follicle dermal papilla cell | 1.06e-09 | 3 |
stem cell of epidermis | 1.06e-09 | 3 |
endothelial cell of umbilical vein | 4.33e-09 | 3 |
endothelial cell of vascular tree | 2.00e-08 | 24 |
vein endothelial cell | 8.39e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.94e-15 | 41 |
duct of male reproductive system | 7.89e-14 | 4 |
integument | 3.67e-13 | 46 |
integumental system | 3.67e-13 | 46 |
male genital duct | 5.80e-11 | 3 |
internal male genitalia | 5.80e-11 | 3 |
hair follicle | 6.01e-10 | 5 |
hair follicle placode | 6.01e-10 | 5 |
dermal papilla | 1.06e-09 | 3 |
papillary layer of dermis | 1.06e-09 | 3 |
dermis | 4.32e-08 | 9 |
dermatome | 4.32e-08 | 9 |
future dermis | 4.32e-08 | 9 |
reproductive organ | 8.43e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.60e-07 | 10 |
ovarian cancer | 3.86e-07 | 14 |