FFCP PHASE1:Hg19::chr2:180110240..180110241,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:180110240..180110241,- | |||
|description=CAGE_peak_at_chr2:180110240..180110241,- | |description=CAGE_peak_at_chr2:180110240..180110241,- | ||
|id=chr2:180110240..180110241,- | |id=chr2:180110240..180110241,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.90e-14;6!CL:0002397;1.90e-14;6!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,5.93e-10,9;CL:0002397,5.93e-10,9;CL:0000346,5.93e-08,3;CL:1000428,5.93e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-11!115;UBERON:0001049!3.77e-10!57;UBERON:0005068!3.77e-10!57;UBERON:0006241!3.77e-10!57;UBERON:0007135!3.77e-10!57;UBERON:0002020!9.51e-10!34;UBERON:0003528!9.51e-10!34;UBERON:0002616!1.34e-09!59;UBERON:0002791!7.57e-09!33;UBERON:0001893!1.76e-08!34;UBERON:0002346!3.22e-08!90;UBERON:0000955!5.52e-08!69;UBERON:0006238!5.52e-08!69;UBERON:0005743!6.42e-08!86;UBERON:0001017!7.78e-08!82;UBERON:0002780!1.83e-07!41;UBERON:0001890!1.83e-07!41;UBERON:0006240!1.83e-07!41;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0003080!3.39e-07!42;UBERON:0001869!5.36e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-11!115;UBERON:0001049!3.77e-10!57;UBERON:0005068!3.77e-10!57;UBERON:0006241!3.77e-10!57;UBERON:0007135!3.77e-10!57;UBERON:0002020!9.51e-10!34;UBERON:0003528!9.51e-10!34;UBERON:0002616!1.34e-09!59;UBERON:0002791!7.57e-09!33;UBERON:0001893!1.76e-08!34;UBERON:0002346!3.22e-08!90;UBERON:0000955!5.52e-08!69;UBERON:0006238!5.52e-08!69;UBERON:0005743!6.42e-08!86;UBERON:0001017!7.78e-08!82;UBERON:0002780!1.83e-07!41;UBERON:0001890!1.83e-07!41;UBERON:0006240!1.83e-07!41;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0003080!3.39e-07!42;UBERON:0001869!5.36e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.30e-21;1!UBERON:0006518;2.30e-21;1!UBERON:0008949;2.30e-21;1!UBERON:0000101;2.30e-21;1!UBERON:0002167;2.30e-21;1!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3!UBERON:0000922;9.45e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.30e-21,1;UBERON:0006518,2.30e-21,1;UBERON:0008949,2.30e-21,1;UBERON:0000101,2.30e-21,1;UBERON:0002167,2.30e-21,1;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0000412,5.93e-08,3;UBERON:0001992,5.93e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.152826811495903,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,3.32397245119126,0,3.25516306073778,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.255679882248303,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.329607748453519,0,0.796991953004279,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.202210631562555,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,2.07119527673598,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0.205116364240755,1.26035848110859,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0.261906694481422,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.098150233615243,0,0.647428837187895,0,1.1598144313382,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,1.0105859447911,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.152826811495903,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,3.32397245119126,0,3.25516306073778,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.255679882248303,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.329607748453519,0,0.796991953004279,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.202210631562555,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,2.07119527673598,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0.205116364240755,1.26035848110859,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0.261906694481422,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.098150233615243,0,0.647428837187895,0,1.1598144313382,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,1.0105859447911,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr2:180110240..180110241,- | |short_description=p@chr2:180110240..180110241,- | ||
}} | }} |
Latest revision as of 03:52, 29 July 2015
Short description: | p@chr2:180110240..180110241, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:180110240..180110241, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 5.93e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.93e-10 | 9 |
hair follicle dermal papilla cell | 5.93e-08 | 3 |
stem cell of epidermis | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.30e-21 | 1 |
right lung lobe | 2.30e-21 | 1 |
lower lobe of lung | 2.30e-21 | 1 |
lobe of lung | 2.30e-21 | 1 |
right lung | 2.30e-21 | 1 |
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
dermal papilla | 5.93e-08 | 3 |
papillary layer of dermis | 5.93e-08 | 3 |