FFCP PHASE1:Hg19::chr2:208619754..208619765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:208619754..208619765,+ | |||
|description=CAGE_peak_at_chr2:208619754..208619765,+ | |description=CAGE_peak_at_chr2:208619754..208619765,+ | ||
|id=chr2:208619754..208619765,+ | |id=chr2:208619754..208619765,+ | ||
|ontology_enrichment_celltype=CL:0002009!5.27e-10!65;CL:0002194!5.74e-09!63;CL:0000576!5.74e-09!63;CL:0000040!5.74e-09!63;CL:0000559!5.74e-09!63;CL:0000557!9.23e-09!71;CL:0002057!1.21e-08!42;CL:0000839!1.46e-07!70;CL:0000860!1.50e-07!45 | |ontology_enrichment_celltype=CL:0002009!5.27e-10!65;CL:0002194!5.74e-09!63;CL:0000576!5.74e-09!63;CL:0000040!5.74e-09!63;CL:0000559!5.74e-09!63;CL:0000557!9.23e-09!71;CL:0002057!1.21e-08!42;CL:0000839!1.46e-07!70;CL:0000860!1.50e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.02e-27;6!CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0000473;8.23e-14;39!CL:0000234;8.23e-14;39!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.23e-27,6;CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:0000473,2.20e-13,48;CL:0000234,2.20e-13,48;CL:0002194,1.11e-10,59;CL:0000576,1.11e-10,59;CL:0000040,1.11e-10,59;CL:0000559,1.11e-10,59;CL:0002009,2.49e-10,61;CL:0000839,1.51e-09,66;CL:0000557,2.10e-09,67;CL:0000766,9.53e-09,72;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.27e-08!80;UBERON:0004765!2.21e-07!101;UBERON:0001434!2.21e-07!101;UBERON:0001474!3.47e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0004909;2.48e-10;2!UBERON:0000412;2.63e-07;3!UBERON:0001992;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0004909,1.89e-10,2;UBERON:0002371,2.78e-08,76;UBERON:0001474,1.14e-07,82;UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3;UBERON:0004765,5.65e-07,90;UBERON:0002405,9.60e-07,93 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0.257575567634187,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.863077176966451,0.768482119587302,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0.580418477257168,0.56738522469114,0,0.502497330513487,1.5644487552606,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.895037932904712,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.286836620748814,0.709336764396714,1.68203280042692,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,4.09889263846434,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0,0,0.348631135379878,0,0,0.460404944679482,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0.121499113316049,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.450772826991655,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0.686791410365586,0,0,0,0.428883182749851,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0.617602894321944,0.219284049578707,0.353378291891762,0.192914038270915,0,0,0,0,0,0.389720617678777,0.531459361253452,0.163565394255844,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158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| |phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0.257575567634187,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.863077176966451,0.768482119587302,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0.580418477257168,0.56738522469114,0,0.502497330513487,1.5644487552606,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.895037932904712,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.286836620748814,0.709336764396714,1.68203280042692,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,4.09889263846434,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0,0,0.348631135379878,0,0,0.460404944679482,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0.121499113316049,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.450772826991655,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0.686791410365586,0,0,0,0.428883182749851,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0.617602894321944,0.219284049578707,0.353378291891762,0.192914038270915,0,0,0,0,0,0.389720617678777,0.531459361253452,0.163565394255844,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158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| ||
|short_description=p@chr2:208619754..208619765,+ | |short_description=p@chr2:208619754..208619765,+ | ||
}} | }} |
Latest revision as of 05:31, 29 July 2015
Short description: | p@chr2:208619754..208619765, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:208619754..208619765, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.23e-27 | 6 |
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
defensive cell | 2.20e-13 | 48 |
phagocyte | 2.20e-13 | 48 |
monopoietic cell | 1.11e-10 | 59 |
monocyte | 1.11e-10 | 59 |
monoblast | 1.11e-10 | 59 |
promonocyte | 1.11e-10 | 59 |
macrophage dendritic cell progenitor | 2.49e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-09 | 66 |
granulocyte monocyte progenitor cell | 2.10e-09 | 67 |
myeloid leukocyte | 9.53e-09 | 72 |
hair follicle dermal papilla cell | 2.79e-07 | 3 |
stem cell of epidermis | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.56e-19 | 1 |
seminiferous tubule of testis | 1.56e-19 | 1 |
epithelium of male gonad | 1.56e-19 | 1 |
epithelial cord | 1.56e-19 | 1 |
sex cord | 1.56e-19 | 1 |
seminiferous tubule epithelium | 1.56e-19 | 1 |
testis sex cord | 1.56e-19 | 1 |
genital ridge | 1.56e-19 | 1 |
primitive sex cord of indifferent gonad | 1.56e-19 | 1 |
coelomic epithelium | 1.56e-19 | 1 |
epithelium of gonad | 1.89e-10 | 2 |
bone marrow | 2.78e-08 | 76 |
bone element | 1.14e-07 | 82 |
dermal papilla | 2.79e-07 | 3 |
papillary layer of dermis | 2.79e-07 | 3 |
skeletal element | 5.65e-07 | 90 |
immune system | 9.60e-07 | 93 |