Personal tools

MCL coexpression mm9:1031: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.408275174462081,-0.832382242152634,-0.804149276264053,-0.893410787937697,-0.949491385371168,-0.926677484391974,-0.89828786845245,-1.01781687254336,-1.04326229135974,-1.00609245694728,-1.08953217247333,-1.10808460751307,-1.04210702717239,-1.02562022257313,-0.698335854700867,-0.708970233215768,-0.839924127044117,-0.809310699734009,-0.846168952815734,-0.772249024469878,-0.0898077809354722,-0.882773310640203,-0.952789508209184,-0.834694312848101,-0.888576267083233,-0.92912988173194,-0.891384155797145,-0.922189701592273,-0.847230627421369,-0.860080330812132,-0.798293717841836,-0.946297371493499,-0.963577035968739,-1.11760807190353,-0.988923252263941,-0.984629387100255,-0.942083013541388,-0.774630626876871,-0.852901405753271,-0.820219772573468,-0.724298164233195,-0.715862420956625,-0.788622529445651,0.362106002565699,0.33321386468301,0.39485311243799,1.10405906033993,0.132884161438939,0.18424722920537,0.210504954343814,0.87007972136742,0.387101087228796,-0.927228950661977,-1.03314723103512,-1.01188603821516,0.7148492999454,0.667354355872187,0.582317191136743,-0.444058831228216,-0.444637751706621,-0.382647351890664,0.963880400867398,1.04202471994203,-0.225923336549179,-0.115313814387905,-0.164372426783626,0.499192430981153,0.369304684823784,-0.427021129504047,-0.434272444674088,-0.394694478421439,-0.213482759494935,-0.112281039724008,-0.578761234855357,-0.580787330188345,-0.465163078069867,-0.464092106589603,-0.439020756824405,-0.491716685530741,-0.480437459068221,-0.469772897267026,-0.347759437109443,-0.346696830877925,-0.336291911453401,-0.338111043496283,-0.0932511212908593,-0.101825637232252,-0.18375174013458,-0.151817646042995,0.156601332506816,0.349259655497649,0.0151980588261925,-0.787883546096096,-0.717343973357158,-0.357745769416409,-0.456723177300675,-0.276790872815774,-0.215069338836587,-0.359945365687405,-0.382397970529275,0.0389467369583235,-0.195732703693485,-0.00797377234407999,-0.119678429426927,-0.509252514541454,-0.555015425507527,-0.623893565018554,-0.319087925205907,-0.30896322145978,0.0202266085213827,0.313866000988277,0.33017780469807,0.266569055976925,0.181108412356641,0.296676886939446,-0.00522198247583577,0.17944325345776,-0.0289625874569078,-0.396371148220571,0.323107992646423,-0.0186213463561334,-0.021907272997996,-0.400553664417534,-0.428613029500519,-0.290216741484204,-0.454288977872161,-0.906312802720402,-0.90677654675987,-0.90630551024238,-0.318405136587132,-0.384043229628992,-0.533912295948405,-0.427207545513914,-0.406839860490832,-0.396251670099703,-0.392220238338803,0.639587598569187,0.0837313775377613,-0.11463173576158,-0.281494352543158,0.157736347619559,0.182495231421577,0.301573586668329,0.302548295267223,0.295484947370758,0.257292729962392,0.218431774938344,0.0931520626419646,0.0255456747902892,0.21773162195093,0.285225008771689,0.387957263620192,0.430155114075346,0.428923703528369,0.424580631192417,0.358992479770963,-0.959848600124326,-0.976619110457933,-0.959309445602751,0.334293014441277,0.357747501967433,0.276217192666975,0.354899075000362,0.3040959780711,0.282240103462009,0.204132201761182,0.260714459760808,0.192493555453455,0.223570203781106,0.239948486077214,0.181933379018333,0.0849124925760233,0.0659267123634806,0.0601027300713892,-0.438604285484469,-0.277734675896863,-0.796050831525658,-0.376500839246668,0.359535139417801,0.371905125986696,0.341551416546923,0.212586862982717,0.216661188933068,0.197281976221328,-0.161931499414796,0.108026104963549,0.0873893567065858,0.125775393448314,0.0717679681079906,-0.164306320405656,-0.177633810651234,-0.25931881639402,0.367268985050653,0.346118762655102,0.359377719272285,0.337271821432257,0.326032068811338,0.323831662191598,0.277442638069981,-0.0568454823892251,-0.0577213268951566,-0.0726559666931017,-0.352119477650265,-0.0529474567762317,-0.107025618646693,-0.213509611474246,-0.201317790824572,-0.174582007990014,-0.125216874646282,-0.0824706289884355,-0.0797026444824136,-0.186499068516869,0.125671561958175,0.054341313467814,-0.0233404281649493,-0.0482249636361865,-0.161379293168635,-0.123474035965661,0.161447161026494,0.283192678376268,0.399051510522361,0.376100363469437,0.397502516809052,0.462141318237445,0.503401500568456,0.411263090872633,0.540207471789248,0.539583479499246,0.529012509978528,0.31159963380466,0.266139528193186,0.261750554347423,-0.764019925202897,-0.738353773151279,-0.380742659091669,-0.180559792781209,-0.289445744798557,-0.27894989057191,0.0547044125580442,-0.0347854610446407,0.262690406237249,0.234339104713394,0.233467846669804,0.420415328642459,0.353353858747737,0.321544678204799,0.407344458004506,0.438632213792894,0.388160007666333,-0.266893343525221,0.237814279549373,0.621656770625043,0.610433995288291,0.406143844082223,-0.417843678938317,0.295057044712092,0.149444445999704,0.175792196788378,0.317428450865427,0.288234570105701,0.196220165694267,0.23927563181611,0.185306795950602,-0.0386930119736894,-0.389388380820655,-0.203724399105645,-0.160480084427779,0.234000930482558,0.340904491037822,0.370106639492926,0.411349165587836,0.4986321650903,0.427475452212832,0.405679531655034,0.128669896255877,-0.0996658618495038,-0.266276328183767,-0.0792859957441692,0.320683639889654,0.19301042334471,0.0897353113800691,-0.042832926919604,-0.100893578917855,-0.307282518293669,-0.34537954713673,0.348086355743523,0.231663459754459,-0.165799414726267,-0.344408566385239,-0.3320936105125,-0.878307201826746,-0.815718827244768,-0.80187345989151,-0.201894824983107,0.316613840760132,0.394906878938514,0.329864176877056,0.335809394722769,0.324217044628457,0.334108067670273,0.317601003733657,0.0268449689843494,-0.191747806972238,-0.354998131000421,-0.804260458523198,0.203245571656526,0.269826345415551,0.429680755434797,0.424196250045748,0.421198557855518,0.380771041356331,0.218451090733785,-0.0511654023453917,-0.460432541980522,-0.46222729459541,-0.561838710478087,0.212867538262948,0.087492111676357,-0.187562950597176,-0.248594741118613,-0.306515597878896,-0.508891654991608,-0.522368021942673,-0.542970040639225,-0.618215264090203,-0.678538602901234,-0.678321579857963,-0.765566069426425,-0.723458322172521,-0.219651329922541,-0.507728697272868,-0.554806269385337,-0.493938410329721,0.287709000707825,0.31848146251409,0.310098847745476,0.0339814483718288,-0.18473374856759,-0.541519572545306,-0.594029132289904,-0.439475214695029,-0.423833700516824,-0.592288832448207,-0.539402633786829,-0.535675910213881,-0.49437427908464,-0.587146017848816,-0.549141114675661,-0.0339556985780054,0.338885351784945,0.293927266441521,0.377580254289452,0.144958228670851,0.16949280820685,0.316221089676894,0.27047729165014,0.361620953017475,0.307237612367132,0.363551672130939,0.318653626848011,0.274508471545032,0.293619181709919,0.279620250018744,0.27448876157201,0.271899496519417,0.256737077307312,0.181358418933658,0.260269189221174,0.291062905030053,0.248536566674689,0.220386485740454,0.293016752749077,0.283432147868365,0.269954038685955,0.257117969142868,0.260516176087733,0.268365808871266,0.233394977225503,0.276811763266123,0.278541934459126,0.22965781411413,0.294518545401,0.338489418804527,0.402118606782657,0.318861828449794,0.319427295911565,0.359695325312173,0.322894364369964,0.273225661579796|coexpression_dpi_cluster_scores_median=0.435446886079417,-0.781112634623852,-0.818892085922207,-1.0328308703058,-1.14759666903706,-1.06699485126112,-1.02622601042336,-1.09295703025989,-1.09039144994749,-1.0562588005125,-1.19272281197394,-1.19272281197394,-1.14759666903706,-1.11119919196704,-0.6769710605068,-0.831040514472887,-0.911116667006004,-0.847508973652052,-0.855312494857621,-0.87870081274881,-0.0963489049620672,-0.97253307817468,-1.04858268822787,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.961242705191947,-0.96115850623868,-0.911116667006004,-0.911116667006004,-0.685230563689561,-0.940573159273661,-0.911116667006004,-1.19272281197394,-1.03308602593017,-0.92999338199143,-1.04401569460409,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.911116667006004,0.264237020330234,0.214949302342642,0.377337818718162,1.04627957009935,0.112559958628539,0.146381888036501,0.179163231188099,0.923359362114991,0.51416628884646,-0.911116667006004,-1.14759666903706,-1.03370593482389,0.731905922876194,0.666169800131734,0.577357819146001,-0.547285464624096,-0.627304257678587,-0.332767199848808,0.992614689797088,1.09350887522868,-0.180177336187244,-0.110622087317203,-0.243316602512041,0.489306135704968,0.402647945947444,-0.476621961365827,-0.431976397394045,-0.414856984437623,-0.221927509700035,-0.12721477049285,-0.529134567642188,-0.51135856271985,-0.458037319934513,-0.459956423325941,-0.412874592875582,-0.505430636795848,-0.46674683537947,-0.567712340665673,-0.392620258455632,-0.37831855370552,-0.269982226258013,-0.373956189054967,-0.139314620980666,-0.114761177557288,-0.223882996569221,-0.283259739544616,0.0975922033618239,0.419937802068433,0.0898613021127075,-0.774695216714209,-0.874783439156617,-0.409879166342326,-0.614511050890506,-0.300240670154165,-0.195248871481463,-0.445582972505993,-0.395152375056611,0,0.0948546635162566,0.254671581468867,0.281752314929818,-0.581401103157592,-0.553660736587071,-0.627304257678587,-0.325137688737245,-0.388614928784871,-0.0370053396934193,0.364631956397246,0.292148917735274,0.217545724931873,0.134144368246223,0.276218300651594,-0.0421362560186385,0.0426258832827291,-0.0192353789353228,-0.458478982357486,0.262417745466946,0.0390887450475892,0.0305685449347499,-0.556449011199903,-0.454608211479711,-0.298938234627867,-0.392719410502897,-0.911116667006004,-0.888727067162498,-0.911116667006004,-0.32692093917427,-0.337664425530182,-0.480706682634452,-0.502127701086787,-0.440753451524863,-0.33585428767836,-0.355785331114813,0.70093903991955,0.0356860489602433,-0.151480964892337,-0.315082610659774,0.198543543004671,0.208957259318689,0.270848780355447,0.265424521312857,0.322366934617833,0.323340647810491,0.277681055809347,0.121725452140837,-0.0341633845620062,0.150095607888866,0.230930518157586,0.356618317146871,0.387928724485306,0.365350439232869,0.409226533035295,0.416168618106728,-0.916582718296884,-0.956352448256115,-0.911116667006004,0.368611962557575,0.418675770829004,0.324133044343501,0.432523604656233,0.357566134132114,0.255418647446939,0.11265393370899,0.255666880606098,0.184804648423473,0.205691223067951,0.140119839278048,0.146862020219687,0.0541389833436641,-0.0305697124659567,0.0537161142731883,-0.476235418724808,-0.27496368961801,-0.972395652522867,-0.417574339925128,0.342029716773854,0.366540116755431,0.416123335801749,0.27751034430309,0.266581827298201,0.174414099447324,-0.171923261018191,0.125684121315413,0.0721166016885484,0.0889444839558771,0.050641313280342,-0.10541763826507,-0.119614566779927,-0.231354166232897,0.359212998495241,0.334731815068136,0.337869948507795,0.35285169361004,0.289797725439405,0.287503530751414,0.240513861595023,0.0053694653293046,-0.0364923495936993,-0.0666588660489023,-0.416553236957382,0.016481701780217,-0.0914471772004133,-0.183624232105886,-0.233633105347102,-0.155764187576244,-0.098082634111273,-0.139133810089351,0.00115383718103357,-0.251267148950018,0.240610103808462,-0.00420664631538215,-0.0162929386530271,-0.00412429164301809,-0.216797310561982,-0.0494767851144671,0.13639193804383,0.363692630041626,0.450347390804232,0.394121762629585,0.390985930334389,0.491804811212256,0.437273983843125,0.432772909232417,0.568350691807225,0.566284162087364,0.532746892421307,0.279247616616926,0.287050554875192,0.290249127816511,-0.83179890435644,-0.873031554087616,-0.42429349264559,-0.153954750180505,-0.303612189605384,-0.316691831427928,0.242318310278899,-0.0564415048686273,0.368853680453544,0.322153140736881,0.359363868802649,0.376698437249952,0.385117913245066,0.382975751463672,0.449332143183564,0.514435713972575,0.537558450810737,-0.320955903898362,0.24944710922059,0.732570465871915,0.685811778848738,0.587462277099715,-0.495288217635216,0.205829692715359,0.203909223120538,0.170720541467728,0.311167717695607,0.296126863419853,0.178035602387515,0.241437607677256,0.158846768623033,-0.0891462131061533,-0.307903468899807,-0.17751227663636,-0.19922354723261,0.237968836627074,0.373676290059826,0.337305107546366,0.41007130348038,0.551819776246592,0.492071033986005,0.440715984971568,0.0645444994996431,-0.014330211851967,-0.221838574898741,-0.129887851896937,0.41188020911181,0.245055005674708,0.127782171938535,-0.0483466957220891,-0.0552784168343843,-0.30595339270976,-0.348463161623456,0.329300546782872,0.201422024680424,-0.187667129564157,-0.317055567365587,-0.345109923012313,-0.911116667006004,-0.854230310789615,-0.854898095728949,-0.256341542269729,0.285049115340814,0.434551526314314,0.367396080318779,0.365180500708087,0.349432580310813,0.33756528008971,0.311707885491015,0.0210861943241287,-0.185428978184266,-0.417430344384476,-0.953445194052117,0.243755130348764,0.242292033150206,0.437236647527197,0.385512191669297,0.42697317983247,0.348301003557058,0.21124139407019,-0.0596354937738426,-0.456113840111546,-0.517378277107885,-0.627304257678587,0.219755033569586,-9.68321830954189e-05,-0.270120070616625,-0.28402148231849,-0.330534087761919,-0.529219097614836,-0.472673762140479,-0.547022934664289,-0.629065452171751,-0.683697207016203,-0.738100205416153,-0.840394792658049,-0.756846359259312,-0.351718321793154,-0.508428368503497,-0.536284196962408,-0.521229546679283,0.268171855942393,0.446802741396344,0.425265678321752,0.13618636420176,-0.243313499436652,-0.56788884536581,-0.627304257678587,-0.403163710567684,-0.547202656461305,-0.6844954935473,-0.627304257678587,-0.489419824038363,-0.540142746892083,-0.660702161644277,-0.527674727672088,-0.0458869214855453,0.231138699131538,0.316848635672328,0.446202272729542,0.127698726469811,0.163890429900599,0.386440237068529,0.287103800899188,0.45956940162664,0.372053331715401,0.38884012775338,0.384563701549623,0.342926321118296,0.38353663550161,0.345911865955251,0.327719334934717,0.372045184490057,0.356224969584154,0.125913670126933,0.3121062871686,0.355625011293487,0.186599515659426,0.170262076853047,0.324182529099477,0.305504923878415,0.353227454723658,0.280422149235983,0.267236723138391,0.353297985474503,0.252580571132233,0.334417258973802,0.348568961335874,0.274229586518847,0.344277226063708,0.343571119916781,0.421007924802365,0.367500648659632,0.361270724379105,0.33543324047424,0.261989713153651,0.26242127066339|gostat_on_MCL_coexpression=GO:0019789;SUMO ligase activity;0.0497069593262916;229615!GO:0031532;actin cytoskeleton reorganization;0.0497069593262916;20416!|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000468!1.27e-09!333;UBERON:0000922!5.32e-07!320|tfbs_overrepresentation_for_novel_motifs=1.11639,1.45672,1.05921,1.20801,0.299217,0.495263,0.587291,0.594722,0.616096,0.826837,0.542749,0.575086,0.59526,0.599731,0.315771,0,0.795315,0.291368,0.561256,0.731589,0.374752,0.586604,0.598814,0.29769,0.419327,0.62766,0.184473,0.516511,0.344372,0.876948,0.50223,0.897561,0.78719,0.166577,1.53201,0.468714,2.14888,0.57142,0.258564,0.652422,0.295233,1.26538,0.258106,0.317766,1.19315,0.469348,0.714592,1.31862,0.219744,0.347313,0.777641,0.654933,0.431711,1.04034,1.0579,0.606984,0.356236,0.56214,1.00328,0.604914,0.877332,0.664501,0.642748,0.766235,1.49952,0.807219,1.19497,1.54543,0.872612,1.39786,1.01778,0.21183,0.293368,1.09164,0.97874,0.936963,0.498755,0.703064,0.859987,0.378988,0.212973,0.812889,0.663039,0.200155,0.975495,1.37268,0.164297,0.145788,0.719558,1.70793,1.26498,0.980512,0.910485,0.823238,0.708155,0.237542,0.203879,0.913319,0.71485,0.399703,0.7665,0.897279,1.02279,0.778243,0.777175,0.507021,0.837607,0.528416,0.383871,0.376549,0.430942,1.02459,0.380122,0.547992,1.27206,0.293461,3.97128,0.484437,0.796633,0.276329,1.09707,0.745011,0.629509,0.702145,1.32639,2.00769,0.595563,0.903645,1.19345,0.308038,1.00568,0.473246,1.16374,0.620831,1.29374,0.0806013,0.446555,0.508896,1.24438,2.07659,1.67603,1.19971,0.641722,0.908128,0.770616,0.507927,0.717753,2.03691,1.13988,0.813943,0.886471,0.545091,1.04192,1.26486,0.619892,1.12411,0.655955,0.327731,0.435579,0.446272,1.25393,0.974632,0.864173,0.428662,0.767269,0.612377,0.763807,1.40533,1.42871|tfbs_overrepresentation_jaspar=MA0003.1;3.65284,MA0004.1;0.481116,MA0006.1;0.311391,MA0007.1;0.465969,MA0009.1;0.92425,MA0014.1;1.41063,MA0017.1;0.89657,MA0019.1;0.740036,MA0024.1;0.880057,MA0025.1;1.15921,MA0027.1;2.57545,MA0028.1;0.860672,MA0029.1;0.858105,MA0030.1;0.864739,MA0031.1;0.828781,MA0038.1;0.62758,MA0040.1;0.936879,MA0041.1;0.404721,MA0042.1;0.391504,MA0043.1;1.02178,MA0046.1;0.960497,MA0048.1;1.8892,MA0050.1;0.520357,MA0051.1;0.636645,MA0052.1;0.945011,MA0055.1;0.648475,MA0056.1;0,MA0057.1;0.117936,MA0058.1;1.00014,MA0059.1;0.397033,MA0060.1;0.232592,MA0061.1;0.261749,MA0063.1;0,MA0066.1;0.616444,MA0067.1;1.27078,MA0068.1;0.121435,MA0069.1;0.945354,MA0070.1;0.93557,MA0071.1;0.519509,MA0072.1;0.927016,MA0073.1;0.00223012,MA0074.1;0.580087,MA0076.1;0.356883,MA0077.1;0.905143,MA0078.1;0.670113,MA0081.1;0.420276,MA0083.1;1.02098,MA0084.1;1.59945,MA0087.1;0.977537,MA0088.1;0.0841779,MA0089.1;0,MA0090.1;0.446539,MA0091.1;0.494398,MA0092.1;0.446857,MA0093.1;0.329976,MA0095.1;0,MA0098.1;0,MA0100.1;0.568369,MA0101.1;0.406019,MA0103.1;0.348572,MA0105.1;1.5116,MA0106.1;1.62423,MA0107.1;0.342432,MA0108.2;0.763162,MA0109.1;0,MA0111.1;1.16549,MA0113.1;0.649407,MA0114.1;0.719313,MA0115.1;1.0246,MA0116.1;0.311187,MA0117.1;0.992087,MA0119.1;0.40661,MA0122.1;1.01209,MA0124.1;1.21735,MA0125.1;1.14291,MA0130.1;0,MA0131.1;0.735438,MA0132.1;0,MA0133.1;0,MA0135.1;1.05845,MA0136.1;0.600242,MA0139.1;1.10833,MA0140.1;0.568252,MA0141.1;0.368264,MA0142.1;0.814115,MA0143.1;0.665982,MA0144.1;0.262477,MA0145.1;2.13876,MA0146.1;2.55638,MA0147.1;0.274511,MA0148.1;0.49752,MA0149.1;0.411562,MA0062.2;0.167299,MA0035.2;0.573016,MA0039.2;0.557969,MA0138.2;0.727395,MA0002.2;0.205289,MA0137.2;0.365364,MA0104.2;0.624968,MA0047.2;0.626803,MA0112.2;0.631649,MA0065.2;0.305574,MA0150.1;0.465855,MA0151.1;0,MA0152.1;0.626912,MA0153.1;1.07519,MA0154.1;1.87278,MA0155.1;0.687925,MA0156.1;0.356017,MA0157.1;0.781683,MA0158.1;0,MA0159.1;0.284457,MA0160.1;0.50056,MA0161.1;0,MA0162.1;1.71182,MA0163.1;1.63182,MA0164.1;0.600609,MA0080.2;0.343316,MA0018.2;0.610433,MA0099.2;0.721008,MA0079.2;0.432076,MA0102.2;1.65195,MA0258.1;0.246285,MA0259.1;0.729797,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.408275174462081,-0.832382242152634,-0.804149276264053,-0.893410787937697,-0.949491385371168,-0.926677484391974,-0.89828786845245,-1.01781687254336,-1.04326229135974,-1.00609245694728,-1.08953217247333,-1.10808460751307,-1.04210702717239,-1.02562022257313,-0.698335854700867,-0.708970233215768,-0.839924127044117,-0.809310699734009,-0.846168952815734,-0.772249024469878,-0.0898077809354722,-0.882773310640203,-0.952789508209184,-0.834694312848101,-0.888576267083233,-0.92912988173194,-0.891384155797145,-0.922189701592273,-0.847230627421369,-0.860080330812132,-0.798293717841836,-0.946297371493499,-0.963577035968739,-1.11760807190353,-0.988923252263941,-0.984629387100255,-0.942083013541388,-0.774630626876871,-0.852901405753271,-0.820219772573468,-0.724298164233195,-0.715862420956625,-0.788622529445651,0.362106002565699,0.33321386468301,0.39485311243799,1.10405906033993,0.132884161438939,0.18424722920537,0.210504954343814,0.87007972136742,0.387101087228796,-0.927228950661977,-1.03314723103512,-1.01188603821516,0.7148492999454,0.667354355872187,0.582317191136743,-0.444058831228216,-0.444637751706621,-0.382647351890664,0.963880400867398,1.04202471994203,-0.225923336549179,-0.115313814387905,-0.164372426783626,0.499192430981153,0.369304684823784,-0.427021129504047,-0.434272444674088,-0.394694478421439,-0.213482759494935,-0.112281039724008,-0.578761234855357,-0.580787330188345,-0.465163078069867,-0.464092106589603,-0.439020756824405,-0.491716685530741,-0.480437459068221,-0.469772897267026,-0.347759437109443,-0.346696830877925,-0.336291911453401,-0.338111043496283,-0.0932511212908593,-0.101825637232252,-0.18375174013458,-0.151817646042995,0.156601332506816,0.349259655497649,0.0151980588261925,-0.787883546096096,-0.717343973357158,-0.357745769416409,-0.456723177300675,-0.276790872815774,-0.215069338836587,-0.359945365687405,-0.382397970529275,0.0389467369583235,-0.195732703693485,-0.00797377234407999,-0.119678429426927,-0.509252514541454,-0.555015425507527,-0.623893565018554,-0.319087925205907,-0.30896322145978,0.0202266085213827,0.313866000988277,0.33017780469807,0.266569055976925,0.181108412356641,0.296676886939446,-0.00522198247583577,0.17944325345776,-0.0289625874569078,-0.396371148220571,0.323107992646423,-0.0186213463561334,-0.021907272997996,-0.400553664417534,-0.428613029500519,-0.290216741484204,-0.454288977872161,-0.906312802720402,-0.90677654675987,-0.90630551024238,-0.318405136587132,-0.384043229628992,-0.533912295948405,-0.427207545513914,-0.406839860490832,-0.396251670099703,-0.392220238338803,0.639587598569187,0.0837313775377613,-0.11463173576158,-0.281494352543158,0.157736347619559,0.182495231421577,0.301573586668329,0.302548295267223,0.295484947370758,0.257292729962392,0.218431774938344,0.0931520626419646,0.0255456747902892,0.21773162195093,0.285225008771689,0.387957263620192,0.430155114075346,0.428923703528369,0.424580631192417,0.358992479770963,-0.959848600124326,-0.976619110457933,-0.959309445602751,0.334293014441277,0.357747501967433,0.276217192666975,0.354899075000362,0.3040959780711,0.282240103462009,0.204132201761182,0.260714459760808,0.192493555453455,0.223570203781106,0.239948486077214,0.181933379018333,0.0849124925760233,0.0659267123634806,0.0601027300713892,-0.438604285484469,-0.277734675896863,-0.796050831525658,-0.376500839246668,0.359535139417801,0.371905125986696,0.341551416546923,0.212586862982717,0.216661188933068,0.197281976221328,-0.161931499414796,0.108026104963549,0.0873893567065858,0.125775393448314,0.0717679681079906,-0.164306320405656,-0.177633810651234,-0.25931881639402,0.367268985050653,0.346118762655102,0.359377719272285,0.337271821432257,0.326032068811338,0.323831662191598,0.277442638069981,-0.0568454823892251,-0.0577213268951566,-0.0726559666931017,-0.352119477650265,-0.0529474567762317,-0.107025618646693,-0.213509611474246,-0.201317790824572,-0.174582007990014,-0.125216874646282,-0.0824706289884355,-0.0797026444824136,-0.186499068516869,0.125671561958175,0.054341313467814,-0.0233404281649493,-0.0482249636361865,-0.161379293168635,-0.123474035965661,0.161447161026494,0.283192678376268,0.399051510522361,0.376100363469437,0.397502516809052,0.462141318237445,0.503401500568456,0.411263090872633,0.540207471789248,0.539583479499246,0.529012509978528,0.31159963380466,0.266139528193186,0.261750554347423,-0.764019925202897,-0.738353773151279,-0.380742659091669,-0.180559792781209,-0.289445744798557,-0.27894989057191,0.0547044125580442,-0.0347854610446407,0.262690406237249,0.234339104713394,0.233467846669804,0.420415328642459,0.353353858747737,0.321544678204799,0.407344458004506,0.438632213792894,0.388160007666333,-0.266893343525221,0.237814279549373,0.621656770625043,0.610433995288291,0.406143844082223,-0.417843678938317,0.295057044712092,0.149444445999704,0.175792196788378,0.317428450865427,0.288234570105701,0.196220165694267,0.23927563181611,0.185306795950602,-0.0386930119736894,-0.389388380820655,-0.203724399105645,-0.160480084427779,0.234000930482558,0.340904491037822,0.370106639492926,0.411349165587836,0.4986321650903,0.427475452212832,0.405679531655034,0.128669896255877,-0.0996658618495038,-0.266276328183767,-0.0792859957441692,0.320683639889654,0.19301042334471,0.0897353113800691,-0.042832926919604,-0.100893578917855,-0.307282518293669,-0.34537954713673,0.348086355743523,0.231663459754459,-0.165799414726267,-0.344408566385239,-0.3320936105125,-0.878307201826746,-0.815718827244768,-0.80187345989151,-0.201894824983107,0.316613840760132,0.394906878938514,0.329864176877056,0.335809394722769,0.324217044628457,0.334108067670273,0.317601003733657,0.0268449689843494,-0.191747806972238,-0.354998131000421,-0.804260458523198,0.203245571656526,0.269826345415551,0.429680755434797,0.424196250045748,0.421198557855518,0.380771041356331,0.218451090733785,-0.0511654023453917,-0.460432541980522,-0.46222729459541,-0.561838710478087,0.212867538262948,0.087492111676357,-0.187562950597176,-0.248594741118613,-0.306515597878896,-0.508891654991608,-0.522368021942673,-0.542970040639225,-0.618215264090203,-0.678538602901234,-0.678321579857963,-0.765566069426425,-0.723458322172521,-0.219651329922541,-0.507728697272868,-0.554806269385337,-0.493938410329721,0.287709000707825,0.31848146251409,0.310098847745476,0.0339814483718288,-0.18473374856759,-0.541519572545306,-0.594029132289904,-0.439475214695029,-0.423833700516824,-0.592288832448207,-0.539402633786829,-0.535675910213881,-0.49437427908464,-0.587146017848816,-0.549141114675661,-0.0339556985780054,0.338885351784945,0.293927266441521,0.377580254289452,0.144958228670851,0.16949280820685,0.316221089676894,0.27047729165014,0.361620953017475,0.307237612367132,0.363551672130939,0.318653626848011,0.274508471545032,0.293619181709919,0.279620250018744,0.27448876157201,0.271899496519417,0.256737077307312,0.181358418933658,0.260269189221174,0.291062905030053,0.248536566674689,0.220386485740454,0.293016752749077,0.283432147868365,0.269954038685955,0.257117969142868,0.260516176087733,0.268365808871266,0.233394977225503,0.276811763266123,0.278541934459126,0.22965781411413,0.294518545401,0.338489418804527,0.402118606782657,0.318861828449794,0.319427295911565,0.359695325312173,0.322894364369964,0.273225661579796
|coexpression_dpi_cluster_scores_median=0.435446886079417,-0.781112634623852,-0.818892085922207,-1.0328308703058,-1.14759666903706,-1.06699485126112,-1.02622601042336,-1.09295703025989,-1.09039144994749,-1.0562588005125,-1.19272281197394,-1.19272281197394,-1.14759666903706,-1.11119919196704,-0.6769710605068,-0.831040514472887,-0.911116667006004,-0.847508973652052,-0.855312494857621,-0.87870081274881,-0.0963489049620672,-0.97253307817468,-1.04858268822787,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.961242705191947,-0.96115850623868,-0.911116667006004,-0.911116667006004,-0.685230563689561,-0.940573159273661,-0.911116667006004,-1.19272281197394,-1.03308602593017,-0.92999338199143,-1.04401569460409,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.911116667006004,-0.911116667006004,0.264237020330234,0.214949302342642,0.377337818718162,1.04627957009935,0.112559958628539,0.146381888036501,0.179163231188099,0.923359362114991,0.51416628884646,-0.911116667006004,-1.14759666903706,-1.03370593482389,0.731905922876194,0.666169800131734,0.577357819146001,-0.547285464624096,-0.627304257678587,-0.332767199848808,0.992614689797088,1.09350887522868,-0.180177336187244,-0.110622087317203,-0.243316602512041,0.489306135704968,0.402647945947444,-0.476621961365827,-0.431976397394045,-0.414856984437623,-0.221927509700035,-0.12721477049285,-0.529134567642188,-0.51135856271985,-0.458037319934513,-0.459956423325941,-0.412874592875582,-0.505430636795848,-0.46674683537947,-0.567712340665673,-0.392620258455632,-0.37831855370552,-0.269982226258013,-0.373956189054967,-0.139314620980666,-0.114761177557288,-0.223882996569221,-0.283259739544616,0.0975922033618239,0.419937802068433,0.0898613021127075,-0.774695216714209,-0.874783439156617,-0.409879166342326,-0.614511050890506,-0.300240670154165,-0.195248871481463,-0.445582972505993,-0.395152375056611,0,0.0948546635162566,0.254671581468867,0.281752314929818,-0.581401103157592,-0.553660736587071,-0.627304257678587,-0.325137688737245,-0.388614928784871,-0.0370053396934193,0.364631956397246,0.292148917735274,0.217545724931873,0.134144368246223,0.276218300651594,-0.0421362560186385,0.0426258832827291,-0.0192353789353228,-0.458478982357486,0.262417745466946,0.0390887450475892,0.0305685449347499,-0.556449011199903,-0.454608211479711,-0.298938234627867,-0.392719410502897,-0.911116667006004,-0.888727067162498,-0.911116667006004,-0.32692093917427,-0.337664425530182,-0.480706682634452,-0.502127701086787,-0.440753451524863,-0.33585428767836,-0.355785331114813,0.70093903991955,0.0356860489602433,-0.151480964892337,-0.315082610659774,0.198543543004671,0.208957259318689,0.270848780355447,0.265424521312857,0.322366934617833,0.323340647810491,0.277681055809347,0.121725452140837,-0.0341633845620062,0.150095607888866,0.230930518157586,0.356618317146871,0.387928724485306,0.365350439232869,0.409226533035295,0.416168618106728,-0.916582718296884,-0.956352448256115,-0.911116667006004,0.368611962557575,0.418675770829004,0.324133044343501,0.432523604656233,0.357566134132114,0.255418647446939,0.11265393370899,0.255666880606098,0.184804648423473,0.205691223067951,0.140119839278048,0.146862020219687,0.0541389833436641,-0.0305697124659567,0.0537161142731883,-0.476235418724808,-0.27496368961801,-0.972395652522867,-0.417574339925128,0.342029716773854,0.366540116755431,0.416123335801749,0.27751034430309,0.266581827298201,0.174414099447324,-0.171923261018191,0.125684121315413,0.0721166016885484,0.0889444839558771,0.050641313280342,-0.10541763826507,-0.119614566779927,-0.231354166232897,0.359212998495241,0.334731815068136,0.337869948507795,0.35285169361004,0.289797725439405,0.287503530751414,0.240513861595023,0.0053694653293046,-0.0364923495936993,-0.0666588660489023,-0.416553236957382,0.016481701780217,-0.0914471772004133,-0.183624232105886,-0.233633105347102,-0.155764187576244,-0.098082634111273,-0.139133810089351,0.00115383718103357,-0.251267148950018,0.240610103808462,-0.00420664631538215,-0.0162929386530271,-0.00412429164301809,-0.216797310561982,-0.0494767851144671,0.13639193804383,0.363692630041626,0.450347390804232,0.394121762629585,0.390985930334389,0.491804811212256,0.437273983843125,0.432772909232417,0.568350691807225,0.566284162087364,0.532746892421307,0.279247616616926,0.287050554875192,0.290249127816511,-0.83179890435644,-0.873031554087616,-0.42429349264559,-0.153954750180505,-0.303612189605384,-0.316691831427928,0.242318310278899,-0.0564415048686273,0.368853680453544,0.322153140736881,0.359363868802649,0.376698437249952,0.385117913245066,0.382975751463672,0.449332143183564,0.514435713972575,0.537558450810737,-0.320955903898362,0.24944710922059,0.732570465871915,0.685811778848738,0.587462277099715,-0.495288217635216,0.205829692715359,0.203909223120538,0.170720541467728,0.311167717695607,0.296126863419853,0.178035602387515,0.241437607677256,0.158846768623033,-0.0891462131061533,-0.307903468899807,-0.17751227663636,-0.19922354723261,0.237968836627074,0.373676290059826,0.337305107546366,0.41007130348038,0.551819776246592,0.492071033986005,0.440715984971568,0.0645444994996431,-0.014330211851967,-0.221838574898741,-0.129887851896937,0.41188020911181,0.245055005674708,0.127782171938535,-0.0483466957220891,-0.0552784168343843,-0.30595339270976,-0.348463161623456,0.329300546782872,0.201422024680424,-0.187667129564157,-0.317055567365587,-0.345109923012313,-0.911116667006004,-0.854230310789615,-0.854898095728949,-0.256341542269729,0.285049115340814,0.434551526314314,0.367396080318779,0.365180500708087,0.349432580310813,0.33756528008971,0.311707885491015,0.0210861943241287,-0.185428978184266,-0.417430344384476,-0.953445194052117,0.243755130348764,0.242292033150206,0.437236647527197,0.385512191669297,0.42697317983247,0.348301003557058,0.21124139407019,-0.0596354937738426,-0.456113840111546,-0.517378277107885,-0.627304257678587,0.219755033569586,-9.68321830954189e-05,-0.270120070616625,-0.28402148231849,-0.330534087761919,-0.529219097614836,-0.472673762140479,-0.547022934664289,-0.629065452171751,-0.683697207016203,-0.738100205416153,-0.840394792658049,-0.756846359259312,-0.351718321793154,-0.508428368503497,-0.536284196962408,-0.521229546679283,0.268171855942393,0.446802741396344,0.425265678321752,0.13618636420176,-0.243313499436652,-0.56788884536581,-0.627304257678587,-0.403163710567684,-0.547202656461305,-0.6844954935473,-0.627304257678587,-0.489419824038363,-0.540142746892083,-0.660702161644277,-0.527674727672088,-0.0458869214855453,0.231138699131538,0.316848635672328,0.446202272729542,0.127698726469811,0.163890429900599,0.386440237068529,0.287103800899188,0.45956940162664,0.372053331715401,0.38884012775338,0.384563701549623,0.342926321118296,0.38353663550161,0.345911865955251,0.327719334934717,0.372045184490057,0.356224969584154,0.125913670126933,0.3121062871686,0.355625011293487,0.186599515659426,0.170262076853047,0.324182529099477,0.305504923878415,0.353227454723658,0.280422149235983,0.267236723138391,0.353297985474503,0.252580571132233,0.334417258973802,0.348568961335874,0.274229586518847,0.344277226063708,0.343571119916781,0.421007924802365,0.367500648659632,0.361270724379105,0.33543324047424,0.261989713153651,0.26242127066339
|gostat_on_MCL_coexpression=GO:0019789;SUMO ligase activity;0.0497069593262916;229615!GO:0031532;actin cytoskeleton reorganization;0.0497069593262916;20416!
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000468!1.27e-09!333;UBERON:0000922!5.32e-07!320
|tfbs_overrepresentation_for_novel_motifs=1.11639,1.45672,1.05921,1.20801,0.299217,0.495263,0.587291,0.594722,0.616096,0.826837,0.542749,0.575086,0.59526,0.599731,0.315771,0,0.795315,0.291368,0.561256,0.731589,0.374752,0.586604,0.598814,0.29769,0.419327,0.62766,0.184473,0.516511,0.344372,0.876948,0.50223,0.897561,0.78719,0.166577,1.53201,0.468714,2.14888,0.57142,0.258564,0.652422,0.295233,1.26538,0.258106,0.317766,1.19315,0.469348,0.714592,1.31862,0.219744,0.347313,0.777641,0.654933,0.431711,1.04034,1.0579,0.606984,0.356236,0.56214,1.00328,0.604914,0.877332,0.664501,0.642748,0.766235,1.49952,0.807219,1.19497,1.54543,0.872612,1.39786,1.01778,0.21183,0.293368,1.09164,0.97874,0.936963,0.498755,0.703064,0.859987,0.378988,0.212973,0.812889,0.663039,0.200155,0.975495,1.37268,0.164297,0.145788,0.719558,1.70793,1.26498,0.980512,0.910485,0.823238,0.708155,0.237542,0.203879,0.913319,0.71485,0.399703,0.7665,0.897279,1.02279,0.778243,0.777175,0.507021,0.837607,0.528416,0.383871,0.376549,0.430942,1.02459,0.380122,0.547992,1.27206,0.293461,3.97128,0.484437,0.796633,0.276329,1.09707,0.745011,0.629509,0.702145,1.32639,2.00769,0.595563,0.903645,1.19345,0.308038,1.00568,0.473246,1.16374,0.620831,1.29374,0.0806013,0.446555,0.508896,1.24438,2.07659,1.67603,1.19971,0.641722,0.908128,0.770616,0.507927,0.717753,2.03691,1.13988,0.813943,0.886471,0.545091,1.04192,1.26486,0.619892,1.12411,0.655955,0.327731,0.435579,0.446272,1.25393,0.974632,0.864173,0.428662,0.767269,0.612377,0.763807,1.40533,1.42871
}}

Latest revision as of 16:17, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:6011987..6012004,-p@chr10:6011987..6012004
-
Mm9::chr15:26825294..26825313,-p1@Fbxl7
Mm9::chr3:89225541..89225558,+p1@Shc1
Mm9::chr3:96500323..96500400,+p1@Pias3
Mm9::chr4:108079281..108079350,-p1@Gpx7
Mm9::chr8:28195992..28196052,+p1@Gpr124
Mm9::chr8:28196307..28196360,+p2@Gpr124


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


GO IDGO nameFDR corrected p-value
GO:0019789SUMO ligase activity0.0497069593262916
GO:0031532actin cytoskeleton reorganization0.0497069593262916



Relative expression of the co-expression cluster over median <br>Analyst:





Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>


Uber Anatomy
Ontology termp-valuen
multi-cellular organism1.27e-09333
embryo5.32e-07320


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.13.65284
MA0004.10.481116
MA0006.10.311391
MA0007.10.465969
MA0009.10.92425
MA0014.11.41063
MA0017.10.89657
MA0019.10.740036
MA0024.10.880057
MA0025.11.15921
MA0027.12.57545
MA0028.10.860672
MA0029.10.858105
MA0030.10.864739
MA0031.10.828781
MA0038.10.62758
MA0040.10.936879
MA0041.10.404721
MA0042.10.391504
MA0043.11.02178
MA0046.10.960497
MA0048.11.8892
MA0050.10.520357
MA0051.10.636645
MA0052.10.945011
MA0055.10.648475
MA0056.10
MA0057.10.117936
MA0058.11.00014
MA0059.10.397033
MA0060.10.232592
MA0061.10.261749
MA0063.10
MA0066.10.616444
MA0067.11.27078
MA0068.10.121435
MA0069.10.945354
MA0070.10.93557
MA0071.10.519509
MA0072.10.927016
MA0073.10.00223012
MA0074.10.580087
MA0076.10.356883
MA0077.10.905143
MA0078.10.670113
MA0081.10.420276
MA0083.11.02098
MA0084.11.59945
MA0087.10.977537
MA0088.10.0841779
MA0089.10
MA0090.10.446539
MA0091.10.494398
MA0092.10.446857
MA0093.10.329976
MA0095.10
MA0098.10
MA0100.10.568369
MA0101.10.406019
MA0103.10.348572
MA0105.11.5116
MA0106.11.62423
MA0107.10.342432
MA0108.20.763162
MA0109.10
MA0111.11.16549
MA0113.10.649407
MA0114.10.719313
MA0115.11.0246
MA0116.10.311187
MA0117.10.992087
MA0119.10.40661
MA0122.11.01209
MA0124.11.21735
MA0125.11.14291
MA0130.10
MA0131.10.735438
MA0132.10
MA0133.10
MA0135.11.05845
MA0136.10.600242
MA0139.11.10833
MA0140.10.568252
MA0141.10.368264
MA0142.10.814115
MA0143.10.665982
MA0144.10.262477
MA0145.12.13876
MA0146.12.55638
MA0147.10.274511
MA0148.10.49752
MA0149.10.411562
MA0062.20.167299
MA0035.20.573016
MA0039.20.557969
MA0138.20.727395
MA0002.20.205289
MA0137.20.365364
MA0104.20.624968
MA0047.20.626803
MA0112.20.631649
MA0065.20.305574
MA0150.10.465855
MA0151.10
MA0152.10.626912
MA0153.11.07519
MA0154.11.87278
MA0155.10.687925
MA0156.10.356017
MA0157.10.781683
MA0158.10
MA0159.10.284457
MA0160.10.50056
MA0161.10
MA0162.11.71182
MA0163.11.63182
MA0164.10.600609
MA0080.20.343316
MA0018.20.610433
MA0099.20.721008
MA0079.20.432076
MA0102.21.65195
MA0258.10.246285
MA0259.10.729797
MA0442.10