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MacroAPE 1083:GCM1 f1: Difference between revisions

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7-111C8;0.971076!10789-110H6;0.511934!10828-111C9;0.368359!10788-110H5;0.281222!10792-110H9;0.219713!10765-110E9;0.400943!10829-111D1;0.13246!10830-111D2;0.487458!10831-111D3;0.904293!10832-111D4;0.620854!10833-111D5;0.256542!10764-110E8;0.343865!10770-110F5;0.346684!10399-106A3;0.605501!10400-106A4;0.346401!10405-106A9;0.49669!10834-111D6;0.320944!10835-111D7;0.42212!10836-111D8;0.990984!10837-111D9;0.123101!10699-109G6;0.670567!10802-111A1;0.704039!10796-110I4;0.75056!10010-101C1;0.918058!10810-111A9;0.903425!10421-106C7;0.982737!10708-109H6;0.270545!12235-129G3;0.538624!12236-129G4;0.45194!12237-129G5;0.645756!10167-103B5;0.189869!10151-102I7;0.733386!10428-106D5;0.612311!10795-110I3;0.487362!10805-111A4;0.738364!10052-101G7;0.43738!10189-103D9;0.686683!10589-108D4;0.425939!10425-106D2;0.887492!10427-106D4;0.823905!10702-109G9;0.741884!10432-106D9;0.143488!10496-107C1;0.638775!10718-109I7;0.484886!10011-101C2;0.172627!10053-101G8;0.739764!10686-109F2;0.0356282!10084-102B3;0.256376!10012-101C3;0.684561!10085-102B4;0.617987!10482-107A5;0.774763!10419-106C5;0.287877!10080-102A8;0.714253!10760-110E4;0.443015!10709-109H7;0.872804!10710-109H8;0.28347!10703-109H1;0.474976!10719-109I8;0.778952!10642-109A3;0.988524!10177-103C6;0.768983!10164-103B2;0.862352!10173-103C2;0.778356!10166-103B4;0.44458!10083-102B2;0.609748!10188-103D8;0.580359!10552-107I3;0.652647!10553-107I4;0.656943!10013-101C4;0.997573!10536-107G5;0.885672!10618-108G6;0.393932!10423-106C9;0.60319!10785-110H2;0.5522!12238-129G6;0.692996!12239-129G7;0.854589!12240-129G8;0.308985!10416-106C2;0.777497!10801-110I9;0.502325!10766-110F1;0.82658!10824-111C5;0.364527!10825-111C6;0.388337!10826-111C7;0.380756!10454-106G4;0.350432!10409-106B4;0.904291!10638-108I8;0.726599!10636-108I6;0.196891!10513-107D9;0.741962!10420-106C6;0.96156!10082-102B1;0.625968!10014-101C5;0.932633!10070-101I7;0.861221!10452-106G2;0.617699!10453-106G3;0.788521!10449-106F8;0.950084!10042-101F6;0.942718!10069-101I6;0.992742!10193-103E4;0.898091!10631-108I1;0.80191!10438-106E6;0.933295!10488-107B2;0.717137!10196-103E7;0.540175!10071-101I8;0.925881!10071-101I8;0.768676!10041-101F5;0.588387!10451-106G1;0.828089!10450-106F9;0.551034!10604-108F1;0.837587!10605-108F2;0.46829!10606-108F3;0.410735!10603-108E9;0.516436!10497-107C2;0.152291!10448-106F7;0.270583!10643-109A4;0.586515!10426-106D3;0.18475!10431-106D8;0.275161!10197-103E8;0.689694!10443-106F2;0.926376!10815-111B5;0.490663!10816-111B6;0.449459!10817-111B7;0.579279!10015-101C6;0.49724!10410-106B5;0.74066!10054-101G9;0.907512!10758-110E2;0.595519!10711-109H9;0.943197!10040-101F4;0.726938!10470-106I2;0.58238!10415-106C1;0.292835!10198-103E9;0.195977!10614-108G2;0.838196!10612-108F9;0.350328!10549-107H9;0.822272!10615-108G3;0.905033!10487-107B1;0.95288!10433-106E1;0.675146!10688-109F4;0.522275!10444-106F3;0.194024!10444-106F3;0.880516!10485-107A8;0.734058!10413-106B8;0.285677!10175-103C4;0.860288!10161-103A8;0.76649!12131-128D7;0.957466!10624-108H3;0.418774!10712-109I1;0.610906!10205-103F7;0.663217!10206-103F8;0.626002!10207-103F9;0.760608!10050-101G5;0.645271!10051-101G6;0.914263!10016-101C7;0.941171!10046-101G1;0.833044!10778-110G4;0.936913!10633-108I3;0.55622!10818-111B8;0.757852!10819-111B9;0.981474!10820-111C1;0.88003!10484-107A7;0.981632!10808-111A7;0.28448!10169-103B7;0.784461!10153-102I9;0.619044!13425-144D5;0.674121!13433-144E4;0.694996!13437-144E8;0.447579!11904-125F5;0.57426!11905-125F6;0.054485!10039-101F3;0.00112461!10791-110H8;0.645953!10017-101C8;0.480785!10045-101F9;0.792961!10509-107D5;0.953486!10839-111E2;0.92398!10692-109F8;0.225572!10079-102A7;0.116246!10078-102A6;0.374243!10721-110A1;0.875254!10569-108B2;0.912722!10570-108B3;0.193545!10571-108B4;0.0636506!10647-109A8;0.0823886!10752-110D5;0.338745!10782-110G8;0.452505!10726-110A6;0.343742!10018-101C9;0.0341067!10086-102B5;0.160584!10182-103D2;0.603885!10165-103B3;0.7944!10499-107C4;0.745872!10408-106B3;0.788807!10019-101D1;0.172702!10068-101I5;0.644321!10075-102A3;0.777454!10077-102A5;0.657661!10727-110A7;0.847038!10775-110G1;0.342984!10412-106B7;0.579602!12231-129F8;0.638275!12232-129F9;0.854841!12233-129G1;0.750238!12234-129G2;0.624732!10414-106B9;0.722831!10170-103B8;0.953838!10183-103D3;0.656355!10150-102I6;0.736427!10174-103C3;0.754966!10155-103A2;0.943046!10038-101F2;0.799558!10838-111E1;0.764039!10759-110E3;0.65454!10514-107E1;0.203129!10465-106H6;0.418638!10691-109F7;0.984413!10843-111E6;0.839592!10844-111E7;0.867043!11747-123G1;0.920533!11748-123G2;0.169396!11749-123G3;0.214615!11750-123G4;0.147211!11751-123G5;0.464793!11840-124H4;0.426355!11752-123G6;0.184852!11753-123G7;0.278527!11754-123G8;0.170846!11755-123G9;0.245177!11756-123H1;0.081974!11833-124G6;0.109374!11760-123H5;0.147859!11836-124G9;0.155296!11758-123H3;0.461579!11835-124G8;0.132251!11762-123H7;0.119753!11838-124H2;0.219487!11757-123H2;0.202406!11759-123H4;0.160514!11761-123H6;0.0482801!11842-124H6;0.256471!11837-124H1;0.0479211!10568-108B1;0.149791!13230-141I8;0.705467!13231-141I9;0.448685!10696-109G3;0.488169!10493-107B7;0.780639!10494-107B8;0.965057!10850-111F4;0.644524!10851-111F5;0.949835!10852-111F6;0.607033!10853-111F7;0.311707!10854-111F8;0.847983!10855-111F9;0.211551!10856-111G1;0.275374!10847-111F1;0.903524!10846-111E9;0.870439!10848-111F2;0.210128!10845-111E8;0.377894!10857-111G2;0.887136!10858-111G3;0.43623!10156-103A3;0.926106!11901-125F2;0.744977!11902-125F3;0.477602!11903-125F4;0.588326!10689-109F5;0.489399!10648-109A9;0.976837!10784-110H1;0.178229!10744-110C6;0.0758784!10772-110F7;0.694262!10474-106I6;0.508191!10600-108E6;0.285751!10684-109E9;0.869065!12226-129F3;0.768015!12227-129F4;0.511674!10508-107D4;0.773144!10539-107G8;0.562484!10607-108F4;0.77728!10555-107I6;0.978394!10774-110F9;0.989595!10637-108I7;0.751196!10663-109C6;0.989752!10728-110A8;0.865911!10729-110A9;0.623638!10430-106D7;0.822978!10730-110B1;0.772072!10813-111B3;0.547454!10812-111B2;0.81975!10037-101F1;0.624921!10172-103C1;0.605494!10163-103B1;0.711279!10076-102A4;0.75159!10073-102A1;0.586329!10036-101E9;0.575912!10195-103E6;0.657062!10277-104E7;0.644861!10434-106E2;0.866654!10550-107I1;0.999575!10545-107H5;0.601526!10544-107H4;0.974466!10704-109H2;0.958203!10510-107D6;0.799748!10558-107I9;0.357179!10020-101D2;0.71862!10732-110B3;0.96327!10049-101G4;0.216248!10698-109G5;0.134536!10437-106E5;0.278645!10417-106C3;0.806793!10035-101E8;0.0745569!10171-103B9;0.603062!10157-103A4;0.678945!10034-101E7;0.697605!10072-101I9;0.619991!10199-103F1;0.707575!10200-103F2;0.727688!10697-109G4;0.616218!10723-110A3;0.765608!10179-103C8;0.512384!10160-103A7;0.451741!10180-103C9;0.341599!10162-103A9;0.194092!10021-101D3;0.358787!10840-111E3;0.875234!10706-109H4;0.0939012!10033-101E6;0.414536!10032-101E5;0.429068!10490-107B4;0.645261!10439-106E7;0.64916!10022-101D4;0.296291!10176-103C5;0.870647!10469-106I1;0.637461!10067-101I4;0.096511!10411-106B6;0.863672!10471-106I3;0.0403821!10030-101E3;0.0591729!10475-106I7;0.823055!10787-110H4;0.48698!10477-106I9;0.932207!10695-109G2;0.824268!11771-123I7;0.493653!11772-123I8;0.799571!11773-123I9;0.238085!10093-102C3;0.802731!10442-106F1;0.602364!10442-106F1;0.820637!10201-103F3;0.636808!10639-108I9;0.695689!11843-124H7;0.518186!11841-124H5;0.289352!10693-109F9;0.300664!10436-106E4;0.524465!10483-107A6;0.735261!10282-104F3;0.911224!10023-101D5;0.90637!10066-101I3;0.840789!10065-101I2;0.718506!10800-110I8;0.634392!10610-108F7;0.787934!10841-111E4;0.817385!10541-107H1;0.885352!10842-111E5;0.926478!10562-108A4;0.765561!10024-101D6;0.610323!10064-101I1;0.925115!10609-108F6;0.566558!10048-101G3;0.975579!10781-110G7;0.776197!10181-103D1;0.615169!10159-103A6;0.903328!10056-101H2;0.960674!10737-110B8;0.513443!10025-101D7;0.7247!10044-101F8;0.546153!10424-106D1;0.465499!10463-106H4;0.533201!10616-108G4;0.862482!10486-107A9;0.234687!10062-101H8;0.825107!10202-103F4;0.892561!10158-103A5;0.749645!10441-106E9;0.885016!10031-101E4;0.841739!10063-101H9;0.666287!10063-101H9;0.604259!11763-123H8;0.612103!11765-123I1;0.549159!11768-123I4;0.550319!10807-111A6;0.421789!10790-110H7;0.290622!10798-110I6;0.598026!10786-110H3;0.754245!10591-108D6;0.680275!10593-108D8;0.48188!10590-108D5;0.727796!10026-101D8;0.784984!10096-102C6;0.371152!10168-103B6;0.305915!10154-103A1;0.852571!10209-103G2;0.913167!10061-101H7;0.887704!10027-101D9;0.81119!10043-101F7;0.0984858!10783-110G9;0.078859!10028-101E1;0.946557!10060-101H6;0.493272!10203-103F5;0.698844!10059-101H5;0.851142!10047-101G2;0.936847!10029-101E2;0.363376!10058-101H4;0.928383!10418-106C4;0.576182!10492-107B6;0.0874266!10694-109G1;0.523435!10797-110I5;0.181686!10057-101H3;0.741262!10100-102D1;0.660987!10055-101H1;0.971376!10204-103F6;0.605987!10191-103E2;0.343633!10563-108A5;0.762606
|name=GCM1_f1
|name=GCM1_f1
|tomtom_result=ACE2#MA0267.1;-4;0.000559689;0.266412;0.268599;7;CACATGCGGGTATT;TGCTGGT;-!SWI5#MA0402.1;-4;0.000767072;0.365126;0.268599;8;CACATGCGGGTATT;TGCTGGTT;+!SOK2#MA0385.1;-1;0.000848432;0.403853;0.268599;11;CACATGCGGGTATT;ACCTGCAGGCA;+!YGR067C#MA0425.1;2;0.00265809;1.26525;0.504904;12;CACATGCGGGTATT;TGAAAAAGTGGGGT;-!YML081W#MA0431.1;-3;0.00427817;2.03641;0.65723;9;CACATGCGGGTATT;GTGCGGGGT;-!PHD1#MA0355.1;-1;0.00484403;2.30576;0.65723;10;CACATGCGGGTATT;TGCTGCAGGT;-!ZMS1#MA0441.1;-4;0.00690769;3.28806;0.820072;9;CACATGCGGGTATT;TGCGGGGAA;-!MIG3#MA0339.1;-4;0.0092299;4.39343;0.884422;7;CACATGCGGGTATT;TGCGGGG;-!RUNX1#MA0002.1;-1;0.00975064;4.64131;0.884422;11;CACATGCGGGTATT;TATTGTGGTTA;+!MIG2#MA0338.1;-4;0.0102434;4.87585;0.884422;7;CACATGCGGGTATT;TGCGGGG;-!Pax6#MA0069.1;2;0.0139316;6.63145;0.997635;12;CACATGCGGGTATT;AACTCATGCGTGAA;-!Arnt::Ahr#MA0006.1;-4;0.0172564;8.21406;0.997635;6;CACATGCGGGTATT;TGCGTG;+!run::Bgb#MA0242.1;-3;0.0202481;9.63811;0.997635;9;CACATGCGGGTATT;TTGCGGTTA;-
}}
}}

Latest revision as of 14:39, 7 September 2012

Full Name: GCM1_f1

Motif matrix
POACGT
13.777777777777784.2222222222222240.99999999999999963.0
25.222222222222220.99999999999999960.77777777777777765.000000000000004
33.04.1111111111111162.8888888888888922.000000000000004
49.8888888888888882.1111111111111120.00.0
50.00.00.012.0
60.00.012.00.0
72.1111111111111127.8888888888888840.02.000000000000004
80.01.11111111111111126.99999999999999643.8888888888888884
90.00.012.00.0
100.00.012.00.0
110.99999999999999963.99999999999999560.77777777777777766.222222222222216
124.7777777777777763.1111111111111082.0000000000000042.111111111111112
130.99999999999999963.88888888888888843.1111111111111083.9999999999999956
140.99999999999999962.222222222222223.99999999999999564.777777777777776

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ACE2#MA0267.1-40.0005596890.2664120.2685997CACATGCGGGTATTTGCTGGT-
SWI5#MA0402.1-40.0007670720.3651260.2685998CACATGCGGGTATTTGCTGGTT+
SOK2#MA0385.1-10.0008484320.4038530.26859911CACATGCGGGTATTACCTGCAGGCA+
YGR067C#MA0425.120.002658091.265250.50490412CACATGCGGGTATTTGAAAAAGTGGGGT-
YML081W#MA0431.1-30.004278172.036410.657239CACATGCGGGTATTGTGCGGGGT-
PHD1#MA0355.1-10.004844032.305760.6572310CACATGCGGGTATTTGCTGCAGGT-
ZMS1#MA0441.1-40.006907693.288060.8200729CACATGCGGGTATTTGCGGGGAA-
MIG3#MA0339.1-40.00922994.393430.8844227CACATGCGGGTATTTGCGGGG-
RUNX1#MA0002.1-10.009750644.641310.88442211CACATGCGGGTATTTATTGTGGTTA+
MIG2#MA0338.1-40.01024344.875850.8844227CACATGCGGGTATTTGCGGGG-
Pax6#MA0069.120.01393166.631450.99763512CACATGCGGGTATTAACTCATGCGTGAA-
Arnt::Ahr#MA0006.1-40.01725648.214060.9976356CACATGCGGGTATTTGCGTG+
run::Bgb#MA0242.1-30.02024819.638110.9976359CACATGCGGGTATTTTGCGGTTA-
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