Personal tools

MacroAPE 1083:PLAG1 f1

From FANTOM5_SSTAR

Revision as of 15:01, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: PLAG1_f1

Motif matrix
POACGT
15.50.516.52.5
25.00.020.00.0
310.00.015.00.0
40.00.025.00.0
50.08.017.00.0
61.014.0000000000000027.0000000000000013.0
713.09.02.01.0
85.08.03.09.0
95.08.06.06.0
1011.02.05.07.000000000000001
118.06.011.00.0
124.02.012.07.000000000000001
1317.04.03.01.0
142.00.020.03.0
151.00.024.00.0
160.00.025.00.0
172.01.017.05.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

YGR067C#MA0425.1-42.67769e-050.01274580.017259613GGGGGCATCAGGAGGGGTGAAAAAGTGGGGT-
MSN4#MA0342.1-124.34581e-050.0206860.01725965GGGGGCATCAGGAGGGGAGGGG+
Pax4#MA0068.145.51788e-050.02626510.017259617GGGGGCATCAGGAGGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
RGM1#MA0366.1-128.98479e-050.04276760.02085495GGGGGCATCAGGAGGGGAGGGG+
MSN2#MA0341.1-120.0001229510.05852470.02085495GGGGGCATCAGGAGGGGAGGGG+
MZF1_5-13#MA0057.1-100.0001333460.06347270.02085497GGGGGCATCAGGAGGGGGGAGGGGGAA+
PLAG1#MA0163.1-10.0001912920.09105480.025643614GGGGGCATCAGGAGGGGGGGGCCCAAGGGGG+
GIS1#MA0306.1-90.0004590040.2184860.04691888GGGGGCATCAGGAGGGGTTTAGGGGT-
YER130C#MA0423.1-90.0004999960.2379980.04691888GGGGGCATCAGGAGGGGAATAGGGGT-
YML081W#MA0431.1-90.0004999960.2379980.04691888GGGGGCATCAGGAGGGGGTGCGGGGT-
RXR::RAR_DR5#MA0159.1-10.00118880.5658680.10141416GGGGGCATCAGGAGGGGAGGTCATGGAGAGGTCA+
Pax5#MA0014.100.002128821.013320.16647117GGGGGCATCAGGAGGGGGGAGCACTGAAGCGTAACCG+
SP1#MA0079.2-70.002547791.212750.18390810GGGGGCATCAGGAGGGGGGGGGCGGGG-
MIG2#MA0338.1-100.003877711.845790.2599137GGGGGCATCAGGAGGGGTGCGGGG-
ADR1#MA0268.1-110.004442952.114850.2637386GGGGGCATCAGGAGGGGGTGGGGT-
Kr#MA0452.1-80.004496892.140520.2637389GGGGGCATCAGGAGGGGCAAAAGGGTTA+
MIG3#MA0339.1-100.005793612.757760.3020357GGGGGCATCAGGAGGGGTGCGGGG-
YPR022C#MA0436.1-100.005793612.757760.3020357GGGGGCATCAGGAGGGGCGTGGGG-
ZMS1#MA0441.1-100.006276642.987680.3099957GGGGGCATCAGGAGGGGTGCGGGGAA-
MZF1_1-4#MA0056.1-120.006979833.32240.3274885GGGGGCATCAGGAGGGGTGGGGA+
SP1#MA0079.2-80.007979533.798260.3565659GGGGGCATCAGGAGGGGGGGGCGGGGT+
MIG1#MA0337.1-110.009603814.571410.3926976GGGGGCATCAGGAGGGGGCGGGGG-
Zfp423#MA0116.1-30.009625094.581540.39269714GGGGGCATCAGGAGGGGGGCACCCAGGGGTGC+
RPH1#MA0372.1-100.01011484.814620.395487GGGGGCATCAGGAGGGGTTAGGGGT-
SUT1#MA0399.1-100.01150825.477890.411097GGGGGCATCAGGAGGGGCGCGGGG+
Klf4#MA0039.1-60.01155155.498490.4110910GGGGGCATCAGGAGGGGTAAAGGAAGG+
TBF1#MA0403.1-100.01212035.769260.411097GGGGGCATCAGGAGGGGTTAGGGTT-
btd#MA0443.1-110.01226635.838760.411096GGGGGCATCAGGAGGGGAGGGGGCGGA+
RDS2#MA0362.1-100.01295726.167620.419277GGGGGCATCAGGAGGGGCTCGGGG+
REI1#MA0364.1-100.01840128.758970.5755797GGGGGCATCAGGAGGGGTCAGGGG-