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MacroAPE 1083:TCTCKCTC,motif323: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;74.035;284.75;297.279;482.936!2;1.139;646.952;288.167;202.742!3;1.139;1.139;246.024;890.698!4;1.139;1135.583;1.139;1.139!5;1.139;10.251;502....")
 
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8!10827-111C8;0.111881!10789-110H6;0.720981!10828-111C9;0.385508!10788-110H5;0.268959!10792-110H9;0.726598!10765-110E9;0.57307!10829-111D1;0.851792!10830-111D2;0.870467!10831-111D3;0.463356!10832-111D4;0.753526!10833-111D5;0.984079!10764-110E8;0.844256!10770-110F5;0.979302!10399-106A3;0.977967!10400-106A4;0.928788!10405-106A9;0.708638!10834-111D6;0.949453!10835-111D7;0.508119!10836-111D8;0.504442!10837-111D9;0.696789!10699-109G6;0.918308!10802-111A1;0.238137!10796-110I4;0.737713!10010-101C1;0.330187!10810-111A9;0.091519!10421-106C7;0.323673!10708-109H6;0.764834!12235-129G3;0.0958463!12236-129G4;0.0780477!12237-129G5;0.513205!10167-103B5;0.223906!10151-102I7;0.0783381!10428-106D5;0.129221!10795-110I3;0.00304904!10805-111A4;0.357995!10052-101G7;0.114807!10189-103D9;0.677975!10589-108D4;0.507683!10425-106D2;0.0196007!10427-106D4;0.0945819!10702-109G9;0.214975!10432-106D9;0.0333756!10496-107C1;0.298868!10718-109I7;0.726732!10011-101C2;0.64472!10053-101G8;0.467968!10686-109F2;0.378611!10084-102B3;0.330901!10012-101C3;0.147261!10085-102B4;0.15739!10482-107A5;0.0602987!10419-106C5;0.0711158!10080-102A8;0.422539!10760-110E4;0.493395!10709-109H7;0.0850624!10710-109H8;0.0396077!10703-109H1;0.358515!10719-109I8;0.013653!10642-109A3;0.0677781!10177-103C6;0.0828583!10164-103B2;0.0654317!10173-103C2;0.109971!10166-103B4;0.099989!10083-102B2;0.13241!10188-103D8;0.0944501!10552-107I3;0.154195!10553-107I4;0.881696!10013-101C4;0.372503!10536-107G5;0.498374!10618-108G6;0.0889162!10423-106C9;0.804212!10785-110H2;0.89896!12238-129G6;0.857336!12239-129G7;0.0946333!12240-129G8;0.0898115!10416-106C2;0.189093!10801-110I9;0.705193!10766-110F1;0.737739!10824-111C5;0.594635!10825-111C6;0.75325!10826-111C7;0.85033!10454-106G4;0.942326!10409-106B4;0.645359!10638-108I8;0.995066!10636-108I6;0.0660283!10513-107D9;0.0944247!10420-106C6;0.394933!10082-102B1;0.117966!10014-101C5;0.9015!10070-101I7;0.43481!10452-106G2;0.763759!10453-106G3;0.138789!10449-106F8;0.0463464!10042-101F6;0.0521649!10069-101I6;0.322817!10193-103E4;0.339105!10631-108I1;0.118331!10438-106E6;0.470814!10488-107B2;0.0708373!10196-103E7;0.818038!10071-101I8;0.839625!10071-101I8;0.570459!10041-101F5;0.0647996!10451-106G1;0.551757!10450-106F9;0.222953!10604-108F1;0.0849703!10605-108F2;0.115511!10606-108F3;0.147234!10603-108E9;0.14569!10497-107C2;0.138427!10448-106F7;0.558177!10643-109A4;0.736645!10426-106D3;0.391618!10431-106D8;0.534775!10197-103E8;0.0311377!10443-106F2;0.449669!10815-111B5;0.742721!10816-111B6;0.726069!10817-111B7;0.633093!10015-101C6;0.74578!10410-106B5;0.237955!10054-101G9;0.663933!10758-110E2;0.484481!10711-109H9;0.239133!10040-101F4;0.169591!10470-106I2;0.123333!10415-106C1;0.141641!10198-103E9;0.500899!10614-108G2;0.599449!10612-108F9;0.349406!10549-107H9;0.110794!10615-108G3;0.262063!10487-107B1;0.0623007!10433-106E1;0.559773!10688-109F4;0.479969!10444-106F3;0.98312!10444-106F3;0.694288!10485-107A8;0.800848!10413-106B8;0.106826!10175-103C4;0.909673!10161-103A8;0.12127!12131-128D7;0.231837!10624-108H3;0.878185!10712-109I1;0.573654!10205-103F7;0.277301!10206-103F8;0.353555!10207-103F9;0.378419!10050-101G5;0.574232!10051-101G6;0.31804!10016-101C7;0.207762!10046-101G1;0.102298!10778-110G4;0.567144!10633-108I3;0.00726562!10818-111B8;0.297695!10819-111B9;0.565348!10820-111C1;0.651377!10484-107A7;0.589582!10808-111A7;0.0739161!10169-103B7;0.575011!10153-102I9;0.100278!13425-144D5;0.146941!13433-144E4;0.199575!13437-144E8;0.271161!11904-125F5;0.19992!11905-125F6;0.604317!10039-101F3;0.796898!10791-110H8;0.10868!10017-101C8;0.810481!10045-101F9;0.850719!10509-107D5;0.406592!10839-111E2;0.0683015!10692-109F8;0.216562!10079-102A7;0.0567508!10078-102A6;0.212397!10721-110A1;0.119472!10569-108B2;0.996331!10570-108B3;0.0719798!10571-108B4;0.0350087!10647-109A8;0.0344299!10752-110D5;0.106421!10782-110G8;0.976397!10726-110A6;0.933725!10018-101C9;0.114952!10086-102B5;0.0941165!10182-103D2;0.428237!10165-103B3;0.14258!10499-107C4;0.184994!10408-106B3;0.911282!10019-101D1;0.791629!10068-101I5;0.406689!10075-102A3;0.932646!10077-102A5;0.401799!10727-110A7;0.11581!10775-110G1;0.979903!10412-106B7;0.803969!12231-129F8;0.211617!12232-129F9;0.195871!12233-129G1;0.0391076!12234-129G2;0.126267!10414-106B9;0.105975!10170-103B8;0.206393!10183-103D3;0.0724915!10150-102I6;0.0860662!10174-103C3;0.120735!10155-103A2;0.161738!10038-101F2;0.218575!10838-111E1;0.224122!10759-110E3;0.039878!10514-107E1;0.0152334!10465-106H6;0.980689!10691-109F7;0.213636!10843-111E6;0.921852!10844-111E7;0.0643084!11747-123G1;0.047022!11748-123G2;0.166578!11749-123G3;0.172636!11750-123G4;0.554511!11751-123G5;0.214651!11840-124H4;0.270065!11752-123G6;0.0452906!11753-123G7;0.0202915!11754-123G8;0.294282!11755-123G9;0.102714!11756-123H1;0.104024!11833-124G6;0.189546!11760-123H5;0.0417837!11836-124G9;0.501091!11758-123H3;0.0353635!11835-124G8;0.0577702!11762-123H7;0.0933628!11838-124H2;0.373653!11757-123H2;0.291418!11759-123H4;0.762022!11761-123H6;0.0534172!11842-124H6;0.829548!11837-124H1;0.105793!10568-108B1;0.0977711!13230-141I8;0.573589!13231-141I9;0.246067!10696-109G3;0.379506!10493-107B7;0.832354!10494-107B8;0.55603!10850-111F4;0.671012!10851-111F5;0.209297!10852-111F6;0.0977919!10853-111F7;0.892409!10854-111F8;0.983834!10855-111F9;0.125045!10856-111G1;0.920621!10847-111F1;0.322819!10846-111E9;0.118488!10848-111F2;0.303467!10845-111E8;0.858781!10857-111G2;0.274638!10858-111G3;0.320311!10156-103A3;0.868456!11901-125F2;0.129617!11902-125F3;0.128167!11903-125F4;0.216013!10689-109F5;0.226555!10648-109A9;0.334998!10784-110H1;0.0715139!10744-110C6;0.271976!10772-110F7;0.571174!10474-106I6;0.344996!10600-108E6;0.527716!10684-109E9;0.265442!12226-129F3;0.38474!12227-129F4;0.951725!10508-107D4;0.48677!10539-107G8;0.117528!10607-108F4;0.235404!10555-107I6;0.235155!10774-110F9;0.194414!10637-108I7;0.0657053!10663-109C6;0.0565546!10728-110A8;0.21748!10729-110A9;0.104673!10430-106D7;0.0853162!10730-110B1;0.455114!10813-111B3;0.0134064!10812-111B2;0.916873!10037-101F1;0.0397837!10172-103C1;0.122055!10163-103B1;0.0983415!10076-102A4;0.14171!10073-102A1;0.105565!10036-101E9;0.0729163!10195-103E6;0.123583!10277-104E7;0.111551!10434-106E2;0.418308!10550-107I1;0.66753!10545-107H5;0.26855!10544-107H4;0.365079!10704-109H2;0.147433!10510-107D6;0.0899257!10558-107I9;0.202261!10020-101D2;0.0589445!10732-110B3;0.899181!10049-101G4;0.0788623!10698-109G5;0.194485!10437-106E5;0.955631!10417-106C3;0.0511675!10035-101E8;0.884944!10171-103B9;0.138846!10157-103A4;0.102424!10034-101E7;0.117427!10072-101I9;0.132913!10199-103F1;0.0656336!10200-103F2;0.177837!10697-109G4;0.230093!10723-110A3;0.0246718!10179-103C8;0.381259!10160-103A7;0.184423!10180-103C9;0.181454!10162-103A9;0.129794!10021-101D3;0.117615!10840-111E3;0.131054!10706-109H4;0.0642652!10033-101E6;0.271037!10032-101E5;0.215423!10490-107B4;0.121286!10439-106E7;0.229039!10022-101D4;0.170244!10176-103C5;0.782708!10469-106I1;0.0998356!10067-101I4;0.174357!10411-106B6;0.264461!10471-106I3;0.236318!10030-101E3;0.86943!10475-106I7;0.421195!10787-110H4;0.0382925!10477-106I9;0.178986!10695-109G2;0.0907182!11771-123I7;0.956349!11772-123I8;0.45278!11773-123I9;0.740536!10093-102C3;0.536504!10442-106F1;0.63791!10442-106F1;0.221877!10201-103F3;0.317747!10639-108I9;0.899743!11843-124H7;0.0958522!11841-124H5;0.31949!10693-109F9;0.658496!10436-106E4;0.39874!10483-107A6;0.565025!10282-104F3;0.829588!10023-101D5;0.350692!10066-101I3;0.143226!10065-101I2;0.701353!10800-110I8;0.849101!10610-108F7;0.0399659!10841-111E4;0.0462076!10541-107H1;0.314766!10842-111E5;0.425033!10562-108A4;0.0493825!10024-101D6;0.0715519!10064-101I1;0.217361!10609-108F6;0.915168!10048-101G3;0.224499!10781-110G7;0.682602!10181-103D1;0.0404239!10159-103A6;0.0952224!10056-101H2;0.150628!10737-110B8;0.145894!10025-101D7;0.138126!10044-101F8;0.130838!10424-106D1;0.180726!10463-106H4;0.731086!10616-108G4;0.203661!10486-107A9;0.239133!10062-101H8;0.432618!10202-103F4;0.655592!10158-103A5;0.350427!10441-106E9;0.485115!10031-101E4;0.0495568!10063-101H9;0.130952!10063-101H9;0.071663!11763-123H8;0.980169!11765-123I1;0.215728!11768-123I4;0.139765!10807-111A6;0.185151!10790-110H7;0.353444!10798-110I6;0.303303!10786-110H3;0.276066!10591-108D6;0.464382!10593-108D8;0.178846!10590-108D5;0.212995!10026-101D8;0.185905!10096-102C6;0.970214!10168-103B6;0.00832382!10154-103A1;0.0972707!10209-103G2;0.18472!10061-101H7;0.303021!10027-101D9;0.639086!10043-101F7;0.768398!10783-110G9;0.730698!10028-101E1;0.0566446!10060-101H6;0.0603665!10203-103F5;0.868227!10059-101H5;0.325146!10047-101G2;0.469096!10029-101E2;0.196597!10058-101H4;0.26569!10418-106C4;0.467045!10492-107B6;0.0773719!10694-109G1;0.160808!10797-110I5;0.134054!10057-101H3;0.47481!10100-102D1;0.384436!10055-101H1;0.894017!10204-103F6;0.628155!10191-103E2;0.736623!10563-108A5;0.172804
|name=TCTCKCTC,motif323,CNhs12312,T:1139.0(27.70%),B:13355.5(19.51%),P:1e-36
|name=TCTCKCTC,motif323,CNhs12312,T:1139.0(27.70%),B:13355.5(19.51%),P:1e-36
|tomtom_result=Trl#MA0205.1;2;1.45664e-05;0.00693358;0.0138672;8;TCTCTCTC;TTGCTCTCTC;+!z#MA0255.1;0;0.0035518;1.69066;1;8;TCTCTCTC;AATCACTCAA;-!id1#MA0120.1;3;0.0111222;5.29416;1;8;TCTCTCTC;TTTTCCTTTTCG;+
}}
}}

Latest revision as of 13:21, 7 September 2012

Full Name: TCTCKCTC,motif323,CNhs12312,T:1139.0(27.70%),B:13355.5(19.51%),P:1e-36

Motif matrix
POACGT
174.035284.75297.279482.936
21.139646.952288.167202.742
31.1391.139246.024890.698
41.1391135.5831.1391.139
51.13910.251502.299625.311
61.139806.4121.139330.31
71.139202.742194.769740.35
81.1391019.4051.139117.317

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.121.45664e-050.006933580.01386728TCTCTCTCTTGCTCTCTC+
z#MA0255.100.00355181.6906618TCTCTCTCAATCACTCAA-
id1#MA0120.130.01112225.2941618TCTCTCTCTTTTCCTTTTCG+
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