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NonredundantMotifs:110

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant110
  • db :UNIPROBE
  • Id :Gata6_secondary
  • name :SCI09
  • score :0.9063094472438954
  • External refs:
EntrezGene:2627
UniProt:2627

  • Internal refs:
EntrezGene:2627


Motif matrix
P0ACGT
10.09603689964191550.07871997815447170.6588709446901420.166372177513471
20.09947285606537160.472199997580050.2721639784108550.156163167943723
30.148727191052790.2270778864598520.4096372744667780.214557648020579
40.2807865495039520.2176541754503640.3221812370074780.179378038038206
50.1087843424259270.7235063492523040.08096988242284680.0867394258989229
60.05817083593446130.04410192984648450.81826985827860.0794573759404547
70.6813460998146470.2275858108774650.06450068794534070.0265674013625475
80.02622579228342630.007470589845245980.07004012100154260.896263496869785
90.8962634968697850.07004012100154260.007470589845245980.0262257922834263
100.02656740136254750.06450068794534070.2275858108774650.681346099814647
110.07945737594045470.81826985827860.04410192984648450.0581708359344613
120.08673942589892290.08096988242284680.7235063492523040.108784342425927
130.08185340770526050.5086305197097290.2679105257396670.141605546845344
140.438598637459050.3029666850766040.1955541396897660.0628805377745799
150.09141323804438960.1823147704988850.5814184437170680.144853547739657
160.1425352257500420.4908396596658150.07380306040522050.292822054178923
170.2546727504777460.1699505943995450.2896639555438230.285712699578887

Sub Motif Members