NonredundantMotifs:119: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;4.997596153846153;0.2379807692307694;5.526442307692307;0.2379807692307694!2;0.0;4.759615384615388;5.288461538461541;0.9519230769230764!3;2.8557692307692353;5.288461538461541;0.9519230769230764;1.9038461538461529!4;0.9519230769230764;0.0;5.288461538461541;4.759615384615388!5;0.0;0.9519230769230764;8.144230769230765;1.9038461538461529!6;0.0;2.432692307692306;8.567307692307693;0.0!7;0.0;2.8557692307692353;8.144230769230765;0.0!8;8.567307692307693;0.0;2.432692307692306;0.0!9;0.0;0.0;10.048076923076918;0.9519230769230764!10;2.8557692307692353;0.0;5.288461538461541;2.8557692307692353!11;0.9519230769230764;0.0;3.3846153846153877;6.66346153846154!12;0.9519230769230764;0.9519230769230764;6.240384615384611;2.8557692307692353!13;0.0;0.5288461538461541;10.471153846153847;0.0!14;0.9519230769230764;1.9038461538461529;7.192307692307693;0.9519230769230764!15;0.9519230769230764;0.0;8.144230769230765;1.9038461538461529!16;0.5288461538461541;4.759615384615388;5.71153846153846;0.0!17;0.2379807692307694;4.997596153846153;4.574519230769235;1.189903846153847 | |||
|entrez_gene_id=28999 | |entrez_gene_id=28999 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:KLF15_f1 /SWISSREGULON:EP300.p2 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:KLF15_f1 /SWISSREGULON:EP300.p2 | ||
|name= | |name=non-redundant119 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=KLF15_f1 | |representative_motif_id=KLF15_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant119
- db :HOCOMOCO
- Id :KLF15_f1
- name :
- score :4.499648167339441
- External refs:
- Internal refs:
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Sub Motif Members
