NonredundantMotifs:130: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=64321
|motif_cluster_2013_march_motif_members= /HOCOMOCO:SOX17_f2 /UNIPROBE:Hbp1_secondary;SCI09
|name=known130
|representative_motif_db=HO...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;8.82375823519874;16.068801803576342;23.21044089250086;8.927213316205659!2;4.864665877248926;11.79934420260573;40.36620416762694;0.0!3;57.0302142474816;0.0;0.0;0.0!4;0.0;57.0302142474816;0.0;0.0!5;57.0302142474816;0.0;0.0;0.0!6;57.0302142474816;0.0;0.0;0.0!7;0.0;0.0;0.0;57.0302142474816!8;10.867843661112556;1.9665573671009586;40.26269848506618;3.933114734201912!9;21.632131038110522;0.0;20.70063049661735;14.697452712753732!10;18.734073129516414;5.899672101302865;17.699016303908593;14.697452712753732!11;12.730895345652739;15.732458936807657;16.76751576241542;11.79934420260573!12;36.43308943342501;5.899672101302865;0.0;14.697452712753732!13;11.79934420260573;3.00161419270875;0.0;42.229255852167114!14;0.0;0.0;8.797780611450866;48.23243363603079!15;0.0;0.0;35.39808320937108;21.632131038110522!16;1.9665573671009586;0.0;17.699016303908593;37.36464057647202!17;0.0;2.8981085101479676;8.90128629401162;45.230819443322034!18;4.554186780731975;4.554186780731975;39.434539171083735;8.487301514933868 | |||
|entrez_gene_id=64321 | |entrez_gene_id=64321 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:SOX17_f2 /UNIPROBE:Hbp1_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:SOX17_f2 /UNIPROBE:Hbp1_secondary;SCI09 | ||
|name= | |name=non-redundant130 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=SOX17_f2 | |representative_motif_id=SOX17_f2 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant130
- db :HOCOMOCO
- Id :SOX17_f2
- name :
- score :0.04004651643343136
- External refs:
- Internal refs:
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Sub Motif Members
