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Difference between revisions of "NonredundantMotifs:130"

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m (Autoedit moved page MotifCluster2013March:Known130 to MotifCluster2013March:Non redundant130 without leaving a redirect: NSchange)
m (Autoedit moved page MotifCluster2013March:Non redundant130 to NonredundantMotifs:Motif130 without leaving a redirect: NSchange)

Revision as of 00:49, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant130
  • db :HOCOMOCO
  • Id :SOX17_f2
  • name :
  • score :0.04004651643343136
  • External refs:
EntrezGene:64321
UniProt:64321

  • Internal refs:
EntrezGene:64321


Motif matrix
P0ACGT
18.8237582351987416.06880180357634223.210440892500868.927213316205659
24.86466587724892611.7993442026057340.366204167626940.0
357.03021424748160.00.00.0
40.057.03021424748160.00.0
557.03021424748160.00.00.0
657.03021424748160.00.00.0
70.00.00.057.0302142474816
810.8678436611125561.966557367100958640.262698485066183.933114734201912
921.6321310381105220.020.7006304966173514.697452712753732
1018.7340731295164145.89967210130286517.69901630390859314.697452712753732
1112.73089534565273915.73245893680765716.7675157624154211.79934420260573
1236.433089433425015.8996721013028650.014.697452712753732
1311.799344202605733.001614192708750.042.229255852167114
140.00.08.79778061145086648.23243363603079
150.00.035.3980832093710821.632131038110522
161.96655736710095860.017.69901630390859337.36464057647202
170.02.89810851014796768.9012862940116245.230819443322034
184.5541867807319754.55418678073197539.4345391710837358.487301514933868

Sub Motif Members