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NonredundantMotifs:137

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant137
  • db :HOCOMOCO
  • Id :IRF5_f1
  • name :
  • score :0.11620521507921608
  • External refs:
EntrezGene:3663
UniProt:3663

  • Internal refs:
EntrezGene:3663


Motif matrix
P0ACGT
10.88888888888889010.01.888888888888892.2222222222222197
23.888888888888890.01.11111111111110980.0
35.00.00.00.0
45.00.00.00.0
50.00.04.1111111111111150.8888888888888901
60.88888888888889010.04.1111111111111150.0
73.111111111111110.01.888888888888890.0
85.00.00.00.0
95.00.00.00.0
101.888888888888890.03.111111111111110.0
110.05.00.00.0
121.11111111111110982.111111111111110.88888888888889010.8888888888888901
134.00.01.00.0
145.00.00.00.0
155.00.00.00.0
163.222222222222220.00.01.7777777777777801
170.02.111111111111112.88888888888888970.0
182.22222222222221970.00.02.7777777777777803
190.00.04.1111111111111150.8888888888888901
203.4444444444444451.11111111111110980.2222222222222220.222222222222222

Sub Motif Members