NonredundantMotifs:154: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=4605
|motif_cluster_2013_march_motif_members= /HOCOMOCO:MYBB_f1
|name=known154
|representative_motif_db=HOCOMOCO
|representative_motif_id=M...") |
m (Autoedit moved page NonredundantMotifs:Motif154 to NonredundantMotifs:154 without leaving a redirect: NSchange) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;1.4210526315789451;0.4736842105263156;1.4210526315789451;5.684210526315789!2;3.0789473684210553;1.894736842105266;4.0263157894736885;0.0!3;1.184210526315789;4.736842105263156;3.0789473684210553;0.0!4;5.684210526315789;3.3157894736842106;0.0;0.0!5;1.894736842105266;1.184210526315789;4.0263157894736885;1.894736842105266!6;0.0;0.0;8.052631578947368;0.947368421052633!7;0.947368421052633;0.0;0.947368421052633;7.105263157894734!8;0.0;0.0;0.0;9.0!9;2.842105263157899;0.947368421052633;4.0263157894736885;1.184210526315789!10;4.736842105263156;0.0;1.184210526315789;3.0789473684210553 | |||
|entrez_gene_id=4605 | |entrez_gene_id=4605 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:MYBB_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:MYBB_f1 | ||
|name= | |name=non-redundant154 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=MYBB_f1 | |representative_motif_id=MYBB_f1 | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant154
- db :HOCOMOCO
- Id :MYBB_f1
- name :
- score :0.017102562649378445
- External refs:
- Internal refs:
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
