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NonredundantMotifs:158

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant158
  • db :UNIPROBE
  • Id :Sox5_secondary
  • name :SCI09
  • score :0.01717827215599952
  • External refs:
EntrezGene:6660
UniProt:6660

  • Internal refs:
EntrezGene:6660


Motif matrix
P0ACGT
10.2465788245501580.2303524223475370.2418083721388540.281260380963451
20.3526112967668340.218685265516230.1566554898002090.272047947916727
30.2494986603782110.1288730636008120.2158344564094640.405793819611513
40.007509494610721210.7365773923051270.08748084720081960.168432265883333
50.5665723185739420.05925855092913460.1910602291429830.183108901353941
60.1493039344121410.02406183784938020.1646802608700310.661953966868447
70.5400146235243120.279107878945380.1339214567419450.0469560407883626
80.7553228135002310.1012222244815170.03831465498634430.105140307031908
90.1703845566582190.09540607368087830.092957516718740.641251852942162
100.09717064472409780.2275911134158380.06550961173516510.609728630124899
110.3483019056725270.1710869800723690.1801874312380160.300423683017089
120.6027181103573320.2002839454617060.1143301443238510.082667799857111
130.1428639840926320.3027838147134190.4532427843248010.101109416869148
140.2523341947155980.2408153501954810.2585412447453170.248309210343605
150.2857582404799040.2149497601582310.2510569014441460.248235097917719

Sub Motif Members