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NonredundantMotifs:174

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant174
  • db :HOCOMOCO
  • Id :PAX2_f1
  • name :
  • score :0.05972669118900677
  • External refs:
EntrezGene:5076
UniProt:5076

  • Internal refs:
EntrezGene:5076


Motif matrix
P0ACGT
111.613590864452129.18187884739715820.6989066397557488.734333916362473
216.67852804126014713.79927109317052.879256948089642616.871654185447206
32.87925694808964267.86526626752060212.65814944276454326.826037609592706
48.90982484583307523.2271817289041929.1818788473971588.909824845833075
527.5196143289639258.04075719699120310.050946496239034.617392245773316
69.7788924946748978.73433391636247322.8056590110971028.909824845833075
70.07.7687031954270710.965630720935376941.49437635160503
84.02037859849560729.3366774840246914.861464886199432.010189299247806
941.318885422134422.0101892992478066.899635546585250.0
107.59321226595651812.930203444328684.71395531786685624.991339239815485
1110.920014145080852.97582002018317829.433240556118226.89963554658525
1213.2022574458928126.106438676993846.0305678977434284.889446247337449
139.8754555667684284.61739224577331625.6849159591867510.05094649623903
142.879256948089642612.0611357954868050.035.28831752439105
154.0203785984956074.88944624733744941.318885422134470.0
1639.212133050793120.02.0101892992478069.006387917926606
173.47627059536735230.6709252786177050.016.081514393982406
1825.8627189427086852.09142921067619767.25292945957778415.021632655004856

Sub Motif Members