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NonredundantMotifs:180

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant180
  • db :SWISSREGULON
  • Id :GTF2A1,2.p2
  • name :GTF2A1,2
  • score :0.0700258131500835
  • External refs:
EntrezGene:2957
UniProt:2957

EntrezGene:2958
UniProt:2958

  • Internal refs:
EntrezGene:2957

EntrezGene:2958


Motif matrix
POACGT
10.47045930.6182761.54927794.212023
246.66469373.5051541.8334374.846751
305.5757786.963839114.310418
445.8859342.67479648.84371429.445591
569.44416715.4128245.96148836.031556
690.6064050.52843535.7151950
7116.6797810.4719319.6983230
88.3038261.656703114.9582371.931269
910.2812178.952193106.0697071.546918
1059.9754414.65769362.2169010
1127.21015928.85128369.8220470.966546
122.24986478.20506141.8559844.539126

Sub Motif Members