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m (Autoedit moved page MotifCluster2013March:Non redundant188 to NonredundantMotifs:Motif188 without leaving a redirect: NSchange)
m (Autoedit moved page NonredundantMotifs:Motif188 to NonredundantMotifs:188 without leaving a redirect: NSchange)
 
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Latest revision as of 01:22, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant188
  • db :HOCOMOCO
  • Id :HXD13_f1
  • name :
  • score :0.027035027744725406
  • External refs:
EntrezGene:3239
UniProt:3239

  • Internal refs:
EntrezGene:3239


Motif matrix
P0ACGT
12.6565217391304411.5260869565217381.5260869565217387.291304347826083
20.00.01.017391304347826211.982608695652166
31.01739130434782620.02.2608695652173939.721739130434786
410.2021739130434760.25434782608695590.25434782608695592.289130434782607
50.93260869565217372.9673913043478210.25434782608695598.845652173913049
61.2717391304347820.25434782608695592.9673913043478218.506521739130427
78.3934782608695591.2717391304347822.4021739130434760.9326086956521737
80.25434782608695590.93260869565217378.280434782608693.5326086956521787
95.7652173913043450.06.2173913043478211.0173913043478262
100.00.011.3043478260869521.6956521739130481
118.6478260869565242.2043478260869520.50869565217391311.6391304347826072

Sub Motif Members