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NonredundantMotifs:62

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known62
  • db :SWISSREGULON
  • Id :MTF1.p2
  • name  :
  • score :3.676152810585477
  • External refs:
  • Internal refs:


Motif matrix
POACGT
119.78294979.876284111.279923249.562657
23.565869218.368024166.00366372.564257
38.81546426.29841513.296325412.091609
42.6877119.83034437.9837630
51.749333441.8414178.3976338.51343
6270.96315515.814212171.0651832.659263
72.588562440.20516314.9764142.731674
8106.363753223.59328316.704678113.840099
90.895053442.1495748.2419189.215268
10101.24787452.489408271.92659934.837932
115.43997146.735555386.50578821.820499
1225.409366380.70449450.9490453.438908
1341.2458345.00100651.81846522.436542
143.509096375.83824954.25497826.89949

Sub Motif Members