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Revision as of 00:49, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant66
  • db :UNIPROBE
  • Id :Hmbox1_2674.1
  • name :CELL08
  • score :0.04528859214187489
  • External refs:
EntrezGene:79618
UniProt:79618

  • Internal refs:
EntrezGene:79618


Motif matrix
P0ACGT
10.2544796686963890.2274693166969440.3045159744101310.213535040196537
20.366458590016930.2011400670161950.09574810104446480.33665324192241
30.4403731587103970.09694684564661580.335148317237140.127531678405846
40.4556342439771850.1466886888831050.2182348474508520.179442219688858
50.4670782823476260.08841427896459630.1400723295260680.30443510916171
60.0100843224564520.8519432415297120.01692941873490310.121043017278933
70.006021377040642270.005412227368727440.03296344947471090.955602946115919
80.7014705736735090.004047448179336420.2920802760875460.00240170205960837
90.01044879573127720.00152133114948390.9857691014278640.00226077169137474
100.003612557167718640.002865099715241690.01237352034801810.981148822769022
110.1107527560414250.009584136977110050.002777435936746920.876885671044718
120.9374765641871910.01037107154389580.02142777587789420.0307245883910191
130.6374529207850080.05801475874974410.1031082282413290.201424092223919
140.1300596500412090.4411304719713580.1354331559140320.2933767220734
150.3330235478830780.1280605183818110.261653374683310.277262559051802
160.2534758307779910.1115539472960410.2001853587468140.434784863179154
170.07372468543715270.4269726777789510.3058163967513260.19348624003257

Sub Motif Members