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Revision as of 09:49, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant78
  • db :UNIPROBE
  • Id :Zfp161_primary
  • name :SCI09
  • score :2.0635901913111185
  • External refs:
EntrezGene:7541
UniProt:7541

  • Internal refs:
EntrezGene:7541


Motif matrix
P0ACGT
10.1426239274771880.1112943649027130.2836877351061230.462393972513976
20.2211696535276560.08140370821321070.4991382462502450.198288392008889
30.2900699523627760.04211362141284080.604904181040660.0629122451837227
40.109755419292830.5595095290705270.2154538293827370.115281222253906
50.1117447787021170.02272737588526450.8505802231095410.0149476223030775
60.01590691526917030.9422911133810910.005560880716329240.0362410906334089
70.08850877186591360.003729143962156860.9028048272707660.00495725690116355
80.004957256901163550.9028048272707660.003729143962156860.0885087718659136
90.03624109063340890.005560880716329240.9422911133810910.0159069152691703
100.01494762230307750.8505802231095410.02272737588526450.111744778702117
110.325358110416770.04942357440421590.5196519879232970.105566327255718
120.06291224518372270.604904181040660.04211362141284080.290069952362776
130.2143351255264260.3882478783535130.1259117148411520.271505281278909
140.128984447822080.3727870088466290.09238990107482820.405838642256462
150.2690584963684970.09842154510732320.484016048561140.148503909963039
160.3621758949630930.1560500439748650.1886422744533920.29313178660865

Sub Motif Members