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NonredundantMotifs:87

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant87
  • db :HOCOMOCO
  • Id :NFIA+NFIB+NFIC+NFIX_si
  • name :
  • score :0.04531406897134382
  • External refs:
EntrezGene:4774
UniProt:4774

EntrezGene:4781
UniProt:4781

EntrezGene:4782
UniProt:4782

EntrezGene:4784
UniProt:4784

  • Internal refs:
EntrezGene:4774

EntrezGene:4781

EntrezGene:4782

EntrezGene:4784


Motif matrix
P0ACGT
166.07893715391491104.6086630964700142.5555794040111251.756820345603956
215.36262760015425545.5431239767913352.3556028986903192201.73864552436441
31.94593282935287240.716922621340531413.92878235747319248.4083621918338
43.4821955893683110.0255.27033585323596.247468557396064
57.68131380007712753.379778072033938253.42682054121760.5120875866718093
614.031199874807564234.6332061103619312.3925195974577543.9430744173729364
7118.2732338513573333.3461706531685837.2565738335418876.12402166193222

Sub Motif Members