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Template:Coexpression clusters: Difference between revisions

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== TFBS overrepresentation ==
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var motifs = ['1-CAATGACATC','1-CSGATGAAT','1-GGAGGAGRAGG','1-TATKWNTTCMGTGTY','1-TGAGTCATTTCCT','1-TGGTCCYSCTGGTCC','1-TWTTWVNSCS','10-ACTTCCTCTTCC','10-ATCGATTG','10-CGCGTGTTA','10-GCTTHCTCAT','10-GGGAAGTGACG','10-GGTTTCTTTT','10-GTAACHDC','10-GTGATGTCACT','10-GTTTCTACG','10-TCCTCCGATT','10-TCTATGAC','10-TCTBACKA','10-TGCGTCATTT','10-TGTCACTGCG','10-VGGAAACGAC','10-WGACAAC','10-YGAGTCHYTD','11-AACGAATCGA','11-AGGCAGTACCTC','11-CGGGGAAATTAC','11-CGTCTGCGTA','11-GATTTCACAACC','11-GCTGTGACGA','11-GTAACGCCCC','11-TCGGGGTGTTTT','11-TSACGCSTCAGT','11-TTTGAGGAAGTTG','11-WACGYACGTG','11-WGTGKKTTTT','12-CGCGGCGGCGGCT','12-CSCCYTTTWA','12-GCNGTGTRAC','12-GTAGCWCSGC','12-GWTYKNKNTTG','12-GYTTGWTATTG','12-SSARTSACMRCA','12-TGCAGTNTTT','12-TGWCACGGCG','13-AATTCCG','13-CBTACGCAA','13-CGTCACAGGAAAC','13-GGATTTGT','13-GGCTGKTACT','13-GTACTTTCCA','13-GTGTCABACG','13-MGCTGACACACGC','13-STTYSWCWTCY','14-ACWTCYTGCTT','14-ATTACGC','14-CACTTCCGTAA','14-RSCGSWVTCT','14-TACGCCC','14-TSTCRGCTR','14-TTAMCGKAA','15-AGRMAACCG','15-CWTCTGACTV','15-NNNTDAGHAA','15-TKABWMGC','16-ATGACTCACTT','16-GCTTYCTS','16-GTKACGDWGC','16-RBYKBTWACG','16-TCAGCTGACG','18-GAAGTGGGTGG','2-AATGCGTT','2-AWTSGCT','2-CCTTTTAA','2-CGBTDATTA','2-GATYGSAS','2-SVGTTTAAA','2-TATATAGCCG','2-TTCAAATCTCCCGC','2-TTWAACCS','3-AAACYGGTTTG','3-AGAAAAVGGAACT','3-ATAAADCGC','3-AWTTSSYS','3-CCCCCCTTTTTT','3-CGCCCATT','3-CGCTATTTAAAC','3-GATGATGAT','3-GCGGGAGGGAGT','3-GCGTTTGAAT','3-MASTTCCCCTTW','3-TTTCGAAT','4-AAAACGCGC','4-AAAWRCG','4-CGGAGAGATA','4-CGTRGTTT','4-CTCTCTCTC','4-GAAGTRCCCAAGAAA','4-GCAAATCGGA','4-GCYTCTYTBTTTTT','4-GGGTTAAA','4-HCTTHYBCTD','4-NTGTTTTTTTKTC','4-SGSTTAWA','4-TAAAAAGACAGC','4-TTAAACCG','4-TTTAAAGCGG','4-TTYCTCTKCWGMR','5-ATTGGGCGG','5-AWTKGKCGVG','5-CCCGCCTTTA','5-CCGGATTTA','5-CGGGAAACTAC','5-CGRAWAT','5-CGTCACTMGT','5-CGTCTGATA','5-GCGAATA','5-GCGATTCAAA','5-GCTTSYTGTTTW','5-GGTGRTTDTT','5-GTTGTTGC','5-NCTSTCTCTTTN','5-SBGTYRTYWGRS','5-TCATTTGC','5-TCTGCGTCAC','5-TGWTTKCCWG','5-TTAATCAGCC','5-WCCGWTAR','6-AAAAACGCCC','6-AAGTTCCGC','6-AATCTCGC','6-AATTAGAGCG','6-ACGCTTGTTT','6-AGGAAGTGAYGYAA','6-AGTTCTGTTTT','6-ATATTTGGCA','6-ATGATTAGTCA','6-ATTAAAGGCG','6-CGCCTAAA','6-CGHYWRA','6-CGTTTCA','6-CTGATYACA','6-CTTCCTGTCAGAG','6-CTTGTGA','6-GAGAGGGGGTGG','6-GCGGTTTTTT','6-GCTGCAAATAGA','6-GTTAACCAATC','6-HNCGKHTKWGRA','6-HWDHHWNCASC','6-TCGGCTG','6-TDTAAWSAG','6-TTACAGC','6-TTAHWHCG','6-YWARCGCN','7-AAAAGMGCS','7-AGTCATATGAC','7-AVAVAGSAAAST','7-CGTCTGA','7-CGTTGCTA','7-GCAGAYTK','7-GCAKYWTTTWT','7-GCTGCATT','7-GCWGCATT','7-GTGTGTGTGT','7-GTKTGWCWC','7-SCGYTTAA','7-TGTTTCT','7-TSTCWCG','7-TTTYTTTTTTCTG','8-AGCAGAAGTG','8-ATCCRAGC','8-CACACYCMCACA','8-CATACGC','8-CGGWGAYW','8-GAAACAACCT','8-GAATGAAAGCG','8-GGHAACT','8-GTTGTTKKGKT','8-HTTTGCGC','8-MHRGTVACTTBN','8-SGAAATGACA','8-TAWAARGCG','8-TBTSTGTBTGC','8-TCGGAGT','8-TGCTGATT','8-TTTGCGGAAGC','8-WNHTTDCGTKTYW','9-AAACAACGCC','9-AAACTGCA','9-AATRCATCGC','9-ACTTMCTHC','9-CGGAAACAA','9-CTGTTGCGT','9-CTSASTCACTG','9-GATCCGCTA','9-GCTAGCAAAA','9-GGGGTTT','9-GTAGGAT','9-HGASWSVGYG','9-RTKACAA','9-TAGTTACCG','9-TATAWACGC','9-TATCCGMH','9-TDDCRNMASM','9-TTTCSCT','9-VCTTKCTKC','AAAAGCACTGC','AAAARAAG','AAACCCCCCC','AAACTATA','AAATAGGGAAGT','AAGACTACCA','AAGATCGAS','AAGCAGGAA','AATGGGG','AATTCCCGG','AAYAATC','ACGAGACGGATGA','ACGTCACAA','AGACTCAGA','AGAGAAAGAG','AGCASAGGA','AGKAGGACCA','AGTCTCAAGTT','AGTTTCCGC','AHR_si','AIRE','AIRE_f2','ALX1','AP2A_f2','ARAGGGGK','ARI3A_do','ARI5B_f1','AR_LNCAP-AR-ChIP-Seq/Homer','ATAGCGAC','ATCATTTCC','ATF5_si','ATF6','ATGATGGTGGC','ATGGAGGTCGTC','ATTGGCGGCG','ATYACCC','BPTF_si','CAAACTTAGCC','CAATGATGG','CACACTTTTTA','CACGAAG','CACTTCCTTCCT','CAGAGTTCTAG','CARGWTGY','CATCCATGTC','CATTAGGACCAG','CATTRTGACG','CAYAAST','CCAATCCGGT','CCAGTACA','CCCACAGACTCAG','CCCCCTATTA','CCCCCTCTCTCC','CCCGAAC','CCCGATCC','CCGCCAATYC','CCGTCTYT','CDC5L_si','CDX1','CDX2_f1','CEBPB_ThioMac-CEBPb-ChIP-Seq/Homer','CEBPB_f1','CGATCCGGAT','CGCTCTCKCT','CGCTTAAA','CGGAAACGGAA','CGGCAGCGGA','CGGCTTAAA','CGTVTCAYCA','CKACTAC','CNhs10624_bl_f0','CNhs10625_bl_f0','CNhs10632_bl_f0','CNhs10633_bl_f0','CNhs10634_bl_f2','CNhs10636_bu_f0','CNhs10643_bu_f2','CNhs10731_bl_f2','CNhs10734_bu_f2','CNhs10751_bu_f2','CNhs10752_bl_f1','CNhs10839_bl_f1','CNhs10843_bu_f2','CNhs10846_bu_f1','CNhs10846_bu_f2','CNhs11047_bu_f2','CNhs11051_bl_f2','CNhs11051_bu_f2','CNhs11068_bl_f2','CNhs11073_bl_f1','CNhs11073_bl_f2','CNhs11185_bl_f2','CNhs11245_bl_f2','CNhs11253_bl_f1','CNhs11257_bl_f2','CNhs11258_bu_f2','CNhs11265_bl_f2','CNhs11267_bl_f2','CNhs11270_bl_f2','CNhs11276_bl_f2','CNhs11279_bu_f2','CNhs11284_bl_f2','CNhs11287_bu_f1','CNhs11290_bl_f2','CNhs11331_bl_f2','CNhs11332_bl_f1','CNhs11341_bu_f1','CNhs11344_bl_f2','CNhs11354_bl_f2','CNhs11372_bl_f2','CNhs11377_bl_f2','CNhs11380_bl_f1','CNhs11380_bu_f0','CNhs11716_bu_f2','CNhs11725_bl_f1','CNhs11725_bu_f2','CNhs11729_bl_f2','CNhs11741_bu_f1','CNhs11747_bu_f2','CNhs11750_bl_f0','CNhs11756_bl_f2','CNhs11756_bu_f1','CNhs11774_bu_f2','CNhs11777_bu_f2','CNhs11781_bl_f0','CNhs11781_bu_f1','CNhs11786_bl_f2','CNhs11786_bu_f1','CNhs11789_bl_f2','CNhs11793_bu_f1','CNhs11811_bl_f2','CNhs11822_bl_f1','CNhs11822_bl_f2','CNhs11828_bl_f2','CNhs11828_bu_f0','CNhs11828_bu_f1','CNhs11828_bu_f2','CNhs11833_bl_f2','CNhs11840_bl_f0','CNhs11840_bl_f2','CNhs11842_bl_f0','CNhs11848_bu_f2','CNhs11853_bu_f1','CNhs11862_bl_f2','CNhs11882_bl_f2','CNhs11882_bu_f2','CNhs11892_bl_f2','CNhs11893_bl_f1','CNhs11893_bu_f2','CNhs11931_bu_f2','CNhs11986_bl_f2','CNhs11986_bu_f1','CNhs11990_bl_f1','CNhs11990_bl_f2','CNhs12001_bu_f0','CNhs12008_bl_f1','CNhs12008_bu_f2','CNhs12013_bu_f2','CNhs12028_bl_f2','CNhs12030_bl_f0','CNhs12035_bu_f0','CNhs12036_bu_f2','CNhs12040_bu_f2','CNhs12043_bu_f1','CNhs12065_bl_f2','CNhs12087_bl_f0','CNhs12087_bu_f1','CNhs12092_bu_f2','CNhs12093_bu_f2','CNhs12096_bl_f2','CNhs12098_bu_f2','CNhs12102_bl_f1','CNhs12103_bl_f1','CNhs12105_bl_f2','CNhs12128_bu_f2','CNhs12192_bu_f0','CNhs12316_bu_f2','CNhs12323_bu_f0','CNhs12341_bl_f2','CNhs12345_bu_f2','CNhs12348_bl_f1','CNhs12494_bl_f0','CNhs12494_bu_f1','CNhs12497_bu_f2','CNhs12498_bl_f2','CNhs12500_bl_f2','CNhs12500_bu_f2','CNhs12502_bl_f1','CNhs12518_bu_f0','CNhs12522_bl_f0','CNhs12523_bl_f1','CNhs12524_bu_f2','CNhs12525_bl_f0','CNhs12530_bu_f2','CNhs12545_bl_f2','CNhs12546_bu_f2','CNhs12566_bl_f1','CNhs12574_bl_f1','CNhs12622_bl_f1','CNhs12623_bl_f2','CNhs12623_bu_f2','CNhs12625_bl_f1','CNhs12625_bu_f2','CNhs12626_bu_f0','CNhs12626_bu_f2','CNhs12627_bu_f2','CNhs12703_bl_f2','CNhs12727_bl_f1','CNhs12733_bl_f2','CNhs12825_bl_f2','CNhs12838_bl_f1','CNhs12839_bu_f2','CNhs12846_bl_f1','CNhs12846_bl_f2','CNhs12849_bu_f0','CNhs12849_bu_f1','CNhs12851_bu_f0','CNhs12856_bu_f2','CNhs12857_bu_f2','CNhs12859_bu_f2','CNhs12920_bl_f2','CNhs12922_bu_f1','CNhs12952_bu_f0','CNhs13059_bl_f0','CNhs13060_bl_f1','CNhs13063_bl_f2','CNhs13063_bu_f1','CNhs13068_bl_f2','CNhs13099_bl_f0','CNhs13099_bu_f2','CNhs13156_bu_f0','CNhs13435_bu_f1','CNhs13439_bl_f1','CNhs13449_bl_f1','CNhs13458_bl_f1','CNhs13458_bl_f2','CNhs13458_bu_f2','CNhs13460_bu_f2','CNhs13464_bu_f2','CNhs13480_bl_f0','CNhs13498_bu_f1','CNhs13505_bu_f1','CNhs13549_bu_f2','CNhs13550_bl_f1','CNhs13793_bl_f2','CNhs13800_bu_f2','CNhs13801_bl_f2','CNhs13847_bu_f0','COE1_f2','CRACCWA','CRATCGC','CREB1_f1','CRX_Retina-Crx-ChIP-Seq/Homer','CSAAYWAG','CTACCAGTAC','CTACTTC','CTBGTCBTC','CTCCTGTTCC','CTCF_f2','CTCTCGATC','CTCTTAGTCATG','CTCTTCCAGTTC','CTSTTTCTTTAAG','CTTCTTTCC','DBP','DDIT3_f1','DMC1_Testis-DMC1-ChIP-Seq/Homer','E2F4_do','EBNA1_Raji-EBNA1-ChIP-Seq(GSE30709)/Homer','EGR1_K562-EGR1-ChIP-Seq/Homer','EOMES_f1','EPAS1_si','ESR1_do','ETV1_GIST48-ETV1-ChIP-Seq/Homer','EVI1_f1','FOSL2_f1','FOXA1_LNCAP-FOXA1-ChIP-Seq/Homer','FOXC2_f1','FOXD1_si','FOXM1','FOXO1_si','FOXP3','FOXP3_f1','FOX{C1','FUBP1_f1','GAAAAGC','GAAGSCG','GAATTSGA','GAGAGACAAAGG','GATA1..3','GATA1_si','GATCGCT','GATTGGTGCAG','GATTTTTWT','GAYCAGG','GCAGGAAACCACAG','GCCGCAAAC','GCCGCTTTAA','GCGCGCG','GCGGACTGAA','GCM1_f1','GCTCCGCTC','GFI1_f1','GGAAGAACTAG','GGACAAG','GGACCCCCTA','GGACCGCCG','GGAGKYTTAA','GGATGACGAA','GGCAACTTCT','GGGAATTTTTG','GGGGGAAAGAAA','GGGTGACTCGTA','GGGTTGCGTCA','GGTGACACAKC','GLI3_si','GTACGRC','GTAGATGTTGA','GTAGTCGA','GTATTAGG','GTCACCCTCA','GTGAATG','GTGACTSGG','GTTCCTATT','GTTGCTCAACAG','GTTGTAGCCC','GTWCAACA','GZF1','HES1_f1','HEY2_f1','HLTF_f1','HMGA2_f1','HNF1A','HNF4A_f1','HNF4G_f1','HNF6_f1','HOXC9_Ainv15-Hoxc9-ChIP-Seq/Homer','HOX{A5','HSF1_f2','HXA13_f1','HXB7_si','HXC8_f1','HXD13_f1','HXD4_f1','HXD9_f1','INSM1_f1','IRF2_f1','IRF5_f1','ISL1_f1','KAISO_f1','KCCGCCDY','KLF12','KLF4_mES-Klf4-ChIP-Seq/Homer','KLF8_f1','LHX2_f1','LHX3','MAFA_f1','MCR_f1','MEF2{A','MEIS1_f2','MLXPL_f1','MSX2_f1','MTE{core}','MTF1_f1','MYBB_f1','MYB_ERMYB-Myb-ChIPSeq(GSE22095)/Homer','NAAAGTT','NANOG_mES-Nanog-ChIP-Seq/Homer','NEUROD1_Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer','NFAC2_f1','NFAT5_f1','NFATC1_motifA:Jurkat-NFATC1-ChIP-Seq/Homer','NFIX','NFKB1_REL_RELA','NFYB_f1','NKX2-1','NKX21_f1','NKX22_si','NKX3-2','NR0B1_si','NR1H4_f1','NR1I3_f2','NR1I3_si','NR2C2_Hela-TR4-ChIP-Seq/Homer','NR6A1_do','NRF1_MCF7-NRF1-ChIP-Seq/Homer','P73_si','PAX3_Rh4-PAX3:FKHR-ChIP-Seq/Homer','PAX4','PAX5_f1','PAX5_motifB:GM12878-PAX5-ChIP-Seq/Homer','PAX6_f1','PAX8_f1','PBX3_GM12878-PBX3-ChIP-Seq/Homer','PKNX1_si','PLAG1_f1','PLAG1_si','PO3F2_si','PO5F1_do','PO6F1_f1','POU1F1','POU3F1..4','POU5F1_mES-Oct4-ChIP-Seq/Homer','PRGR_f1','PROP1_f1','PRRX2_f1','PTF1A_f1','PURA_f1','RAGAGAGAGAGAG','RARA_f1','RARG_do','REST_f1','RFX1_NPC-Rfx1-ChIP-Seq/Homer','RGAAAGSAGAAG','RGCGGCSGC','RORA_f1','RRCGAACC','RREB1_si','RTATACTKT','RUNX1..3','RXR{A','SGAGMKTAK','SMAD3_f1','SNAI2_f1','SOX17_f2','SOX18_f1','SOX2','SP1_f1','SP4_f1','SPDEF_VCaP-SPDEF-ChIP-Seq/Homer','SPZ1','SREBP1A_HepG2-Srebp1a-ChIP-Seq/Homer','SRF_do','STAT4_CD4-Stat4-ChIP-Seq/Homer','STCGWAG','STTCGVC','SUH_f1','TAACTGTACA','TACAGTATTC','TACCGGATC','TACCGGT','TACCTCCGC','TACTGYAG','TAGAMCCTAT','TAGGAAAC','TAGGCGA','TAGTCTGACG','TATCCCATT','TBP','TBX20_Heart-Tbx20-ChIP-Seq(GSE29636)/Homer','TBX3_f1','TBX5_HL1-Tbx5.biotin-ChIP-Seq/Homer','TCATCAGTTCC','TCATCCACATC','TCCTATTG','TCGCGCYG','TCKCGCT','TCSAGMT','TCSCGAGCTG','TCTCGCT','TCTCKCTC','TCTTCAA','TCTTCTTCTTC','TEAD1_f1','TEF','TF7L2_f1','TFCP2L1_mES-Tfcp2l1-ChIP-Seq/Homer','TFDP1','TGAATTGGCTG','TGACATCATAATG','TGACCAA','TGACGAA','TGCAGCATTA','TGGACGAA','TGGGAADTGTAGT','TGGTYCTMRT','TGIF1_f1','TGIF1_si','TGTGTGCG','THB_do','TKAAAGBGRCA','TLX1..3_NFIC{dimer}','TLX1_f1','TMCGYCR','TOPORS','TP53_Saos-p53-ChIP-Seq/Homer','TTAAGCGGC','TTATTCTGCTG','TTCCKGTCYG','TTCGTTCC','TTCTGCACC','TTCTTCAGCG','TTGATGATGATG','TTGCAGCGTA','TTGGCTCGGC','TTGGGRAATTTA','TTGTAGGT','TTHCTVTW','TTTTTCGCGGCT','TTYCGSTTC','TYTYTYTYTYYYYY','USF1_GM12878-Usf1-ChIP-Seq/Homer','VDR_f2','WYCKMKCG','YCYCTTT','YTCKCTT','YTGGTCCTGVT','ZBT7A_f1','ZBTB16','ZBTB4!METH_f1','ZBTB4_si','ZBTB6_si','ZEP2_si','ZFP161','ZN219_f1','ZN333_f1','ZN350_f1','ZN384_f1','ZN423_f1','ZN589_f1','ZNF143','motif10','motif1026','motif103','motif1032','motif1044','motif1049','motif106','motif1068','motif1097','motif11','motif119','motif123','motif125','motif134','motif136','motif143','motif145','motif162','motif177','motif183','motif189','motif196','motif198','motif199','motif210','motif218','motif222','motif233','motif238','motif247','motif252','motif260','motif261','motif263','motif27','motif282','motif29','motif290','motif293','motif297','motif3','motif30','motif300','motif301','motif307','motif313','motif316','motif324','motif33','motif335','motif351','motif357','motif359','motif361','motif365','motif37','motif373','motif378','motif382','motif41','motif415','motif424','motif432','motif44','motif440','motif441','motif443','motif445','motif459','motif46','motif461','motif463','motif468','motif475','motif477','motif478','motif486','motif489','motif494','motif498','motif499','motif515','motif516','motif517','motif527','motif550','motif553','motif554','motif558','motif560','motif561','motif563','motif568','motif57','motif577','motif585','motif588','motif602','motif606','motif61','motif614','motif624','motif627','motif64','motif647','motif66','motif660','motif667','motif668','motif670','motif679','motif680','motif682','motif684','motif686','motif688','motif74','motif75','motif77','motif80','motif816','motif822','motif827','motif830','motif835','motif837','motif839','motif843','motif858','motif861','motif867','motif87','motif882','motif885','motif886','motif890','motif895','motif897','motif898','motif9','motif90','motif906','motif909','motif915','motif929','motif931','motif935','motif943','motif944','motif950','motif953','motif956','motif957','motif963','motif965','motif969','motif97','motif970','motif977','motif981','motif990','motif991','motif999','motif_AAGTCN','motif_ACAGTN','motif_ACNGGT','motif_ACTGGN','motif_AGGGCN','motif_AGNCGT','motif_AGNCTT','motif_ANAGCT','motif_ANCAGT','motif_ANCGCT','motif_ANCTGT','motif_ANGACT','motif_ANGCCT','motif_ANGTCT','motif_ANTGCT','motif_ATGNCT','motif_ATNGCT','motif_CAAGTNNCA','motif_CACNGT','motif_CAGNAT','motif_CAGNCT','motif_CAGNGT','motif_CAGTNT','motif_CANCTG','motif_CANGTT','motif_CANTTG','motif_CATGNT','motif_CCAGCN','motif_CCANGT','motif_CCANTG','motif_CCCTNA','motif_CCNAGT','motif_CCNGAT','motif_CCNGCA','motif_CCNGGA','motif_CGACNT','motif_CGANCT','motif_CGNTGA','motif_CNAATG','motif_CNACTG','motif_CNAGGT','motif_CNAGTCTC','motif_CNAGTT','motif_CNATGG','motif_CNCAGT','motif_CNCATG','motif_CNGAAT','motif_CNGACT','motif_CNGATG','motif_CNGATT','motif_CNGCAG','motif_CNGCAT','motif_CNGCCA','motif_CNGGAT','motif_CNGGTA','motif_CTAGNG','motif_CTAGNT','motif_CTANGG','motif_CTATGN','motif_CTCANG','motif_CTGGGN','motif_CTGGNG','motif_CTNAGT','motif_CTNATG','motif_CTNGAT','motif_CTNTAG','motif_CTTANG','motif_CTTNAG','motif_GAACNT','motif_GAAGNT','motif_GACNCT','motif_GACNGT','motif_GACNTG','motif_GAGNCT','motif_GANACT','motif_GANCAT','motif_GANGTC','motif_GANTCT','motif_GANTTC','motif_GATCTN','motif_GATNTC','motif_GCAANT','motif_GCAATN','motif_GCACNT','motif_GCANTG','motif_GCNACT','motif_GCNCAT','motif_GCNGAT','motif_GCTCANGG','motif_GCTNAT','motif_GGACTN','motif_GGAGCN','motif_GGANTC','motif_GGCANT','motif_GGCNAT','motif_GGCNCA','motif_GGGACN','motif_GGNATC','motif_GGNCAT','motif_GNAATC','motif_GNACAT','motif_GNACCT','motif_GNACTT','motif_GNATCC','motif_GNATCT','motif_GNATTC','motif_GNCAAT','motif_GNCATC','motif_GNCATG','motif_GNCATT','motif_GNCTAG','motif_GNGAGC','motif_GNGCTA','motif_GNTACC','motif_GNTACT','motif_GNTCAT','motif_GTAANC','motif_GTACTN','motif_GTANCT','motif_GTCANC','motif_GTCANG','motif_GTCATN','motif_GTCNAG','motif_GTNACC','motif_GTNACT','motif_GTNATC','motif_GTNCAT','motif_GTNGAC','motif_GTTNAC','motif_TAACNG','motif_TAANGC','motif_TACANG','motif_TACTGN','motif_TAGCNG','motif_TAGGNC','motif_TAGNCT','motif_TAGNGC','motif_TAGNTC','motif_TAGTNC','motif_TANAGC','motif_TCAANG','motif_TCACNG','motif_TCAGNT','motif_TCCNGC','motif_TCNAGT','motif_TCNGAG','motif_TCNGGA','motif_TCTNAG','motif_TGAANC','motif_TGACNC','motif_TGACNG','motif_TGANAC','motif_TGANCT','motif_TGCNAG','motif_TGCTAN','motif_TGGAGN','motif_TGNACC','motif_TGNACT','motif_TGNCAC','motif_TGNCAT','motif_TGNCCA','motif_TGNCTA','motif_TGNGAC','motif_TGNTCA','motif_TGTANC','motif_TGTNAC','motif_TNAAGC','motif_TNAGCA','motif_TNAGCC','motif_TNAGGC','motif_TNATGC','motif_TNCAAG','motif_TNCACG','motif_TNCAGA','motif_TNCAGT','motif_TNCATG','motif_TNCGCA','motif_TNCTAG','motif_TNCTGA','motif_TNGACA','motif_TNGGAC','motif_TNGGCA','motif_TNTAGC','motif_TNTGCA','motif_TTACNG','motif_TTCANG','motif_TTCNGA','motif_TTGACN','motif_TTGCAN','motif_TTGNCA','motif_TTNAGC','motif_TTNCAG'];
var pval = [</html>{{{tfbs_overrepresentation}}}<html>];
var data = [];
for(i1=0;i1<motifs.length;i1++){
data.push([motifs[i1],pval[i1]]);
}
    $('#tfbs_overexpression_table').dataTable({
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[[Category:Coexpression_clusters]]
[[Category:Coexpression_clusters]]


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Revision as of 16:37, 9 August 2012

Full id: {{{full_id}}}


Phase1 CAGE Peaks


Pathway enrichment analysis Analyst: Emmanuel Dimont

GOStat results on Coexpression cluster The results for GOStat analysis on co-expressed clusters("All" category). <br>Analyst: Erik Arner

Sample enrichment analysis The results for enrichment analysis on "All" data of MCL co-expression cluster. That are sorted by ontologies each samples belonging. Original Data <br>Analyst: Hideya Kawaji

TFBS overrepresentation


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