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Template:TimeCourse: Difference between revisions

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<tr><th scope="row" align="right">Series:</th><td>{{{series}}}</td></tr>
<tr><th scope="row" align="right">Series:</th><td>{{{series}}}</td></tr>
<tr><th scope="row" align="right">Species:</th><td>{{{species}}}</td></tr>
<tr><th scope="row" align="right">Species:</th><td>{{{species}}}</td></tr>
<tr><th scope="row" align="right">Genomic View:</th><td>[{{{zenbu_config}}} Zenbu]</td></tr>
<tr><th scope="row" align="right">Genomic View:</th><td><span class="plainlinks">[{{{zenbu_config}}} Zenbu]</span></td></tr>
<tr><th scope="row" align="right">Expression table:</th><td>[{{{tet_config}}} TET]</td></tr>
<tr><th scope="row" align="right">Expression table:</th><td><span class="plainlinks">[{{{tet_config}}} FILE]</span></td></tr>
<tr><th scope="row" align="right">Link to TET:</th><td>[{{{tet_file}}} FILE]</td></tr>
<tr><th scope="row" align="right">Link to TET:</th><td><span class="plainlinks">[{{{tet_file}}} TET]</span></td></tr>
<tr><th scope="row" align="right">Sample providers :</th><td>{{{collaborators}}}</td></tr>
<tr><th scope="row" align="right">Sample providers :</th><td>{{{collaborators}}}</td></tr>
<tr><th scope="row" align="right">Germ layer:</th><td>{{{germ_layer}}}</td></tr>
<tr><th scope="row" align="right">Germ layer:</th><td>{{{germ_layer}}}</td></tr>
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}
}
</style>
</style>
<script type="text/javascript" language="javascript" src="/5/sstar/rb_js/jquery-1.7.1.min.js"></script>
<script type="text/javascript" src="/resource_browser/rb_js/custom/convert.js"></script>
<script type="text/javascript" src="/resource_browser/rb_js/custom/convert.js"></script>
<script type="text/javascript" src="/5/sstar/rb_js/html5button/datatables.min.js"></script>
<script type="text/javascript" src="/5/sstar/rb_js/html5button/datatables.min.js"></script>
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$(document).ready(function() {
$(document).ready(function() {
     var oTable =  $('.cl_list').DataTable({
     var oTable =  $('.cl_list').DataTable({
        dom: 'Blfrtip',
lengthMenu: [[-1], ["All"]],
lengthMenu: [[-1], ["All"]],
         buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5']
         buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5'],
        columns: [{title: "Sample"},{title: "Name"},{title: "Time point"},{title: "Donor/Replica"}]
});
});
} );
} );
Line 78: Line 81:
|?Time=Time point
|?Time=Time point
|?Donor=Donor/Replica
|?Donor=Donor/Replica
|format=ttable
|format=table
|class=cl_list stripe cell-border order-column compact
|class=cl_list stripe cell-border order-column compact
|limit=2000
|limit=2000
|searchlabel=
|searchlabel=
|mainlabel=Sample
|mainlabel=Sample
|headers=plain
|headers=hide
}}
}}
{{#arraymap:{{{samples|}}}|,|$|{{#set:sample=[[FF:$]]}}}}
{{#arraymap:{{{samples|}}}|,|$|{{#set:sample=[[FF:$]]}}}}

Latest revision as of 10:57, 15 March 2022

Series:{{{series}}}
Species:{{{species}}}
Genomic View:[{{{zenbu_config}}} Zenbu]
Expression table:[{{{tet_config}}} FILE]
Link to TET:[{{{tet_file}}} TET]
Sample providers :{{{collaborators}}}
Germ layer:{{{germ_layer}}}
Primary cells or cell line:{{{primary_cells}}}
Time span:{{{time_span}}}
Number of time points:{{{number_time_points}}}


Overview

{{{TCOverview}}}

Sample description

{{{TCSample_description}}}

Quality control

{{{TCQuality_control}}}

Profiled time course samples

Only samples that passed quality controls (Arner et al. 2015) are shown here. The entire set of samples are downloadable from FANTOM5 human / mouse samples





Property "Series" (as page type) with input value "{{{series}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Collaborators" (as page type) with input value "{{{collaborators}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.