Template:UBERON: Difference between revisions
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{{Fontsize|3|FF samples}}{{#info:<br>It includes FANTOM5 samples that overlay the [http://uberon.org/ Uberon] ontology}} | {{Fontsize|3|FF samples}}{{#info:<br>It includes FANTOM5 samples that overlay the [http://uberon.org/ Uberon] ontology}} | ||
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{{#ifexpr: 0 ={{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]][[sample_species::Human (Homo sapiens)]][[name::+]][[datafreeze_phase:: | {{#ifexpr: 0 ={{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]][[sample_species::Human (Homo sapiens)]][[name::+]][[datafreeze_phase::2]]|?name=|format=count}}||{{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]]|[[sample_species::Human (Homo sapiens)]][[name::+]][[datafreeze_phase::2]]|?name=|limit=10|format=ul|headers=hide|intro=<b>Human (Homo sapiens)</b>}} }} | ||
{{#ifexpr: 0 ={{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]][[sample_species::Mouse (Mus musculus)]][[name::+]][[datafreeze_phase:: | {{#ifexpr: 0 ={{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]][[sample_species::Mouse (Mus musculus)]][[name::+]][[datafreeze_phase::2]]|?name=|format=count}}||{{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]]|[[sample_species::Mouse (Mus musculus)]][[name::+]][[datafreeze_phase::2]]|?name=|limit=10|format=ul|headers=hide|intro=<b>Mouse (Mus musculus)</b>}} }} | ||
<!--{{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]]|[[sample_species::Rat (Rattus rattus)]][[name::+]][[datafreeze_phase::1]]|?name=|limit=10|format=ul|headers=hide|intro=<b>Rat (Rattus rattus)</b>}} | <!--{{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]]|[[sample_species::Rat (Rattus rattus)]][[name::+]][[datafreeze_phase::1]]|?name=|limit=10|format=ul|headers=hide|intro=<b>Rat (Rattus rattus)</b>}} | ||
{{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]]|[[sample_species::Dog (Canis lupus familaris)]][[name::+]][[datafreeze_phase::1]]|?name=|limit=10|format=ul|headers=hide|intro=<b>Dog (Canis lupus familaris)</b>}} | {{#ask:[[ancestors_in_anatomy_facet::{{FULLPAGENAME}}]]|[[sample_species::Dog (Canis lupus familaris)]][[name::+]][[datafreeze_phase::1]]|?name=|limit=10|format=ul|headers=hide|intro=<b>Dog (Canis lupus familaris)</b>}} | ||
Revision as of 11:17, 9 September 2015
| Name: | {{{name}}} | ||
|---|---|---|---|
| Namespace: | {{{namespace}}} | ||
| Definition: | {{{def}}} | ||
| Xrefs: |
| ||
| Synonyms: | {{{synonym}}} | ||
| Comments: | {{{comment}}} | ||
| Alt_id: | {{{alt_id}}} | ||
| Subset: | {{{subset}}} | ||
| Created by: | {{{created_by}}} | ||
| Creation date: | {{{obo_creation_date}}} | ||
| Has quality: | {{{has_quality}}} |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
NA
Children
NA
Ontology Tree: Loaded from BioPortal
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} ({{{name}}}), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
"{{{obo_creation_date}}}" contains an extrinsic dash or other characters that are invalid for a date interpretation.
Property "Property value" (as page type) with input value "{{{property_value}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
