UBERON:0000083: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=mesonephric tubule | |name=mesonephric tubule | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000080 | |part_of=UBERON:0000080 | ||
Latest revision as of 17:06, 12 September 2014
| Name: | mesonephric tubule | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A mesonephric tubule is an epithelial tube that is part of the mesonephros[GO]. Genital ridge that is next to the mesonephros[WP]." [Wikipedia:Mesonephric_tubules] | ||
| Xrefs: |
| ||
| Synonyms: | "tubuli mesonephrici" RELATED LATIN [Wikipedia:Mesonephric_tubules] | ||
| Comments: | TODO check |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003914(epithelial tube),UBERON:0005103(mesonephric epithelium),UBERON:0006555(excretory tube) |
|---|---|
| part_of: | UBERON:0000080(mesonephros) |
Children
| is a: | UBERON:0000084 (ureteric bud),UBERON:0003074 (mesonephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000083 (mesonephric tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_820dac00011a0f37d66f1bb1ee8d23e8 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_820dac00011a0f37d66f1bb1ee8d23e8 | p4@Spink12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:167688595..167688624, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:10488683..10488691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379322..21379338, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr17:35249011..35249020, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr6:18338054..18338077, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26731771..26731780, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_a864da2db5f3afbc8f42cb20d942e524 | p21@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr7:151928014..151928021, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:192816674..192816714, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_a864da2db5f3afbc8f42cb20d942e524 | p8@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr6:49817766..49817772, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_a864da2db5f3afbc8f42cb20d942e524 | p2@Gm6040, p2@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:34107562..34107572, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:155722142..155722175, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:100350777..100350782, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:75866210..75866235, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:31379972..31379981, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_a864da2db5f3afbc8f42cb20d942e524 | p5@9230104L09Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379125..21379144, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845404..59845416,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:59845404..59845416, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:36016859..36016897, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_a864da2db5f3afbc8f42cb20d942e524 | p2@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:19141471..19141518, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_a864da2db5f3afbc8f42cb20d942e524 | p11@Wars |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr6:18338054..18338077, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:112721323..112721328, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:19141447..19141469, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:20817297..20817313, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:90156002..90156013, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_a864da2db5f3afbc8f42cb20d942e524 | p11@Prrx1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_a864da2db5f3afbc8f42cb20d942e524 | p11@Arhgef40 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_a864da2db5f3afbc8f42cb20d942e524 | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:31379486..31379501, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26731771..26731780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:19062951..19062955, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_a864da2db5f3afbc8f42cb20d942e524 | p4@Bpi |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr5:31379377..31379384, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr16:28323634..28323657, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:164479340..164479350, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:113585667..113585673, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_a864da2db5f3afbc8f42cb20d942e524 | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr7:56772735..56772741, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51734060..51734066,+#_a864da2db5f3afbc8f42cb20d942e524 | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379159..21379162,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379159..21379162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:50280152..50280179, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_a864da2db5f3afbc8f42cb20d942e524 | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:90155923..90155932, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_a864da2db5f3afbc8f42cb20d942e524 | p3@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:75798157..75798162, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_a864da2db5f3afbc8f42cb20d942e524 | p1@Wfdc6b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_a864da2db5f3afbc8f42cb20d942e524 | p2@Defb23 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:63779573..63779582, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr15:83143938..83143953, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_a864da2db5f3afbc8f42cb20d942e524 | p4@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:101958844..101958851, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr9:26611214..26611227, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chrX:20419453..20419476, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:89596972..89596981, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_a864da2db5f3afbc8f42cb20d942e524 | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_a864da2db5f3afbc8f42cb20d942e524 | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr11:53955299..53955306, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_a864da2db5f3afbc8f42cb20d942e524 | p@chr8:96014490..96014496, + |
