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UBERON:0000471: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=compound organ component
|name=compound organ component
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0003103
|part_of=UBERON:0003103

Latest revision as of 17:09, 12 September 2014

Name:compound organ component
Namespace:FANTOM
Definition:"Multi-tissue structure that is part of a compound organ." [CARO:0000019, CARO:MAH]
Xrefs:
links:

AAO:0010017
AEO:0000019
BILA:0000019
CARO:0000019
EHDAA2:0003019
HAO:0000019
TAO:0001489
TGMA:0001835
XAO:0003039

ZFA:0001489
Alt_id: UBERON:CARO_0000019-XAO_0003039-ZFA_0001489
Subset: upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000481(multi-tissue structure)
part_of:UBERON:0003103(compound organ)



Children

is a:UBERON:0000016 (endocrine pancreas),UBERON:0000958 (medulla)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000471 (compound organ component), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results