Personal tools

UBERON:0000480

From FANTOM5_SSTAR

Revision as of 17:09, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:anatomical group
Namespace:FANTOM
Definition:"Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [CARO:0000054, CARO:MAH]
Xrefs:
links:

AAO:0010008
AEO:0000054
BILA:0000054
CARO:0000054
EHDAA2:0003054
HAO:0000054
TAO:0001512
TGMA:0001846
XAO:0003001

ZFA:0001512
Alt_id: UBERON:CARO_0000054-XAO_0003001-ZFA_0001512
Subset: upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000061(anatomical structure)
part_of:UBERON:0000468(multi-cellular organism)



Children

is a:UBERON:0000467 (anatomical system),UBERON:0000477 (anatomical cluster),UBERON:0001015 (musculature),UBERON:0004716 (conceptus),UBERON:0010191 (aortic system),UBERON:0018254 (skeletal musculature)
disjoint from:UBERON:0000476 (acellular anatomical structure)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000480 (anatomical group), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results