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Difference between revisions of "UBERON:0001465"

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{{UBERON
 
{{UBERON
|id=UBERON:0001465
+
|alt_id=UBERON:FMA_24974-MA_0000046
|name=knee
 
|namespace=
 
|def="A segment of the hindlimb that corresponds to the joint connecting a hindlimb stylopod and zeugopod." [UBERON:cjm]
 
|xref=BTO:0003595;;EFO:0001957;;EHDAA2:0000895;;EHDAA:5159;;EHDAA:6184;;EMAPA:17493;;FMA:24974;;GAID:48;;galen:Knee;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/8d/Male_Knee_by_David_Shankbone.jpg/200px-Male_Knee_by_David_Shankbone.jpg;;MA:0000046;;MESH:A.01.378.610.450;;OpenCyc:Mx4rvVjPKZwpEbGdrcN5Y29ycA;;SCTID:361291001;;VHOG:0000347
 
|is_a=UBERON:0008784
 
|synonym="knee region" EXACT []
 
 
|comment=
 
|comment=
|alt_id=UBERON:FMA_24974-MA_0000046
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="A segment of the hindlimb that corresponds to the joint connecting a hindlimb stylopod and zeugopod." [UBERON:cjm]
|subset=uberon_slim
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0001465
 +
|is_a=UBERON:0008784
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=knee
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=UBERON:0000978
 
|part_of=UBERON:0000978
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
+
|subset=uberon_slim
|preceded_by=
+
|synonym="knee region" EXACT []
 +
|union_of=
 +
|xref=BTO:0003595;;EFO:0001957;;EHDAA2:0000895;;EHDAA:5159;;EHDAA:6184;;EMAPA:17493;;FMA:24974;;GAID:48;;galen:Knee;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/8d/Male_Knee_by_David_Shankbone.jpg/200px-Male_Knee_by_David_Shankbone.jpg;;MA:0000046;;MESH:A.01.378.610.450;;OpenCyc:Mx4rvVjPKZwpEbGdrcN5Y29ycA;;SCTID:361291001;;VHOG:0000347
 
}}
 
}}

Latest revision as of 08:18, 12 September 2014

Name:knee
Namespace:FANTOM
Definition:"A segment of the hindlimb that corresponds to the joint connecting a hindlimb stylopod and zeugopod." [UBERON:cjm]
Xrefs:
links:

BTO:0003595
EFO:0001957
EHDAA2:0000895
EHDAA:5159
EHDAA:6184
EMAPA:17493
FMA:24974
GAID:48
galen:Knee
[1]
MA:0000046
MESH:A.01.378.610.450
OpenCyc:Mx4rvVjPKZwpEbGdrcN5Y29ycA
SCTID:361291001

VHOG:0000347
Synonyms: "knee region" EXACT []
Alt_id: UBERON:FMA_24974-MA_0000046
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0008784(lower limb segment)
part_of:UBERON:0000978(leg)



Children

part of:UBERON:0001485 (knee joint),UBERON:0003321 (mesenchyme of knee),UBERON:0003577 (knee connective tissue)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001465 (knee), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results