UBERON:0001678: Difference between revisions
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|located_in= | |located_in= | ||
|name=temporal bone | |name=temporal bone | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004339 | |part_of=UBERON:0004339 | ||
Latest revision as of 17:19, 12 September 2014
| Name: | temporal bone | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The temporal bones are situated at the sides and base of the skull, and lateral to the temporal lobes of the cerebrum." [Wikipedia:Temporal_bone] | ||
| Xrefs: |
| ||
| Synonyms: | "os temporale" RELATED LATIN [Wikipedia:Temporal_bone] | ||
| Comments: | The temporal bone consists of four parts: * Squama temporalis * Mastoid portion * Petrous portion (Petrosal ridge) * Tympanic part[WP]. AO notes: Note the Temporal bone is not explicitly categorized to a part of the cranium in FMA. Taxon notes: fusion of squamosal + angular (tympanic annulus) [derm] + petrosal (prootic + opisthotic)[chond] + styloid process[splanc.] | ||
| Alt_id: | UBERON:FMA_52737-MA_0001476 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003462(facial bone),UBERON:0008193(pneumatized bone),UBERON:0015212(lateral structure) |
|---|---|
| part_of: | UBERON:0004339(calvarium) |
Children
| part of: | UBERON:0001694 (petrous part of temporal bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001678 (temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_329b6ed7138a6c61a2ec9877f02c3792 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_329b6ed7138a6c61a2ec9877f02c3792 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_329b6ed7138a6c61a2ec9877f02c3792 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_329b6ed7138a6c61a2ec9877f02c3792 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_329b6ed7138a6c61a2ec9877f02c3792 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_329b6ed7138a6c61a2ec9877f02c3792 | p9@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_329b6ed7138a6c61a2ec9877f02c3792 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Fanca |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Dytn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_329b6ed7138a6c61a2ec9877f02c3792 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:101908153..101908163, + |
