UBERON:0002102
From FANTOM5_SSTAR
Name: | forelimb | ||
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Namespace: | FANTOM | ||
Definition: | "A (free) limb that is connected to a pectoral girdle. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pectoral girdle and its parts." [UBERONREF:0000003, Wikipedia:Forelimb] | ||
Xrefs: |
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Synonyms: |
"anteriormost limb" EXACT [] "fore limb" EXACT [] "foreleg" RELATED [] "forelimb" EXACT [] "free part of upper limb" EXACT [FMA:24878] "free upper limb" EXACT [FMA:24878, UBERONREF:0000003] "membrum superius" EXACT [FMA:7183, FMA:TA] "pectoral limb" EXACT [] "superior member" EXACT [] "upper extremity" EXACT [] "upper limb" EXACT [] | ||
Comments: | AO notes: note that this corresponds to FMA:'free upper limb' (a limb segment), NOT 'upper limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb. Usage notes: Note distinction between arm and forelimb. hand is part of forelimb, but not part of arm | ||
Alt_id: | UBERON:FMA_7183-MA_0000025-MIAA_0000394-XAO_0003030 | ||
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002101(limb),UBERON:0004710(pectoral appendage) |
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develops_from: | UBERON:0005417(forelimb bud) |
part_of: | UBERON:0010708(pectoral complex),UBERON:0000153(anterior region of body),UBERON:0010708(pectoral complex) |
Children
is a: | UBERON:0000024 (forelimb wing) |
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derives from: | FF:0011277 (mouse forelimb- embryo E17 sample),FF:0011278 (mouse forelimb- embryo E18 sample),FF:0011314 (mouse forelimb- embryo E11 sample),FF:0011322 (mouse forelimb- embryo E12 sample),FF:0011331 (mouse forelimb- embryo E13 sample),FF:0011342 (mouse forelimb- embryo E14 sample),FF:0011351 (mouse forelimb- embryo E15 sample) |
part of: | UBERON:0002398 (manus),UBERON:0003531 (forelimb skin),UBERON:0008785 (upper limb segment) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
... further results Mouse (Mus musculus)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002102 (forelimb), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.33e-86 | FFCP PHASE2:Mm9::chr2:74499300..74499309,-#_f0d8f2944531a749fb1a8d195dc6650e | p5@Evx2 |
1.33e-86 | FFCP PHASE1:Mm9::chr2:74499300..74499309,-#_f0d8f2944531a749fb1a8d195dc6650e | p5@Evx2 |
2.4e-74 | FFCP PHASE1:Mm9::chr2:165983686..165983720,-#_9568b07d0918292100cb409905703231 | p@chr2:165983686..165983720, - |
2.4e-74 | FFCP PHASE2:Mm9::chr5:120256413..120256428,-#_9568b07d0918292100cb409905703231 | p@chr5:120256413..120256428, - |
2.4e-74 | FFCP PHASE1:Mm9::chr15:51484092..51484121,-#_9568b07d0918292100cb409905703231 | p@chr15:51484092..51484121, - |
2.4e-74 | FFCP PHASE1:Mm9::chr5:120256413..120256428,-#_9568b07d0918292100cb409905703231 | p@chr5:120256413..120256428, - |
2.4e-74 | FFCP PHASE2:Mm9::chr15:51484092..51484121,-#_9568b07d0918292100cb409905703231 | p@chr15:51484092..51484121, - |
2.4e-74 | FFCP PHASE2:Mm9::chr2:165983686..165983720,-#_9568b07d0918292100cb409905703231 | p@chr2:165983686..165983720, - |
1.21e-61 | FFCP PHASE1:Mm9::chr2:74505324..74505330,+#_a1a79208981c5772e1cd95371cc2a16b | p@chr2:74505324..74505330, + |
1.21e-61 | FFCP PHASE2:Mm9::chr2:74505324..74505330,+#_a1a79208981c5772e1cd95371cc2a16b | p@chr2:74505324..74505330, + |
2.24e-61 | FFCP PHASE1:Mm9::chr2:74506264..74506286,+#_5151331ec7c551b9fcf68952b2214549 | p1@Hoxd13 |
2.24e-61 | FFCP PHASE2:Mm9::chr2:74506264..74506286,+#_5151331ec7c551b9fcf68952b2214549 | p1@Hoxd13 |
3.63e-52 | FFCP PHASE2:Mm9::chr2:74513064..74513089,+#_2ecdc27ed7f4086441e7b5d93e475847 | p2@Hoxd12 |
3.63e-52 | FFCP PHASE1:Mm9::chr2:74513064..74513089,+#_2ecdc27ed7f4086441e7b5d93e475847 | p2@Hoxd12 |
4.62e-52 | FFCP PHASE2:Mm9::chr2:74499251..74499258,-#_c125e5e5e8f72295540ee1b6d6ba7493 | p4@Evx2 |
4.62e-52 | FFCP PHASE1:Mm9::chr2:74499251..74499258,-#_c125e5e5e8f72295540ee1b6d6ba7493 | p4@Evx2 |
5.88e-52 | FFCP PHASE2:Mm9::chr2:33574246..33574257,-#_2014925bfde2ad059d5c03728be68fd2 | p3@ENSMUST00000130532 |
5.88e-52 | FFCP PHASE1:Mm9::chr2:33574246..33574257,-#_2014925bfde2ad059d5c03728be68fd2 | p3@ENSMUST00000130532 |
5.28e-50 | FFCP PHASE2:Mm9::chr2:74521516..74521525,+#_742a44e4cbc08cf391376e6eb378ba61 | p1@ENSMUST00000136302 |
5.28e-50 | FFCP PHASE1:Mm9::chr2:74521516..74521525,+#_742a44e4cbc08cf391376e6eb378ba61 | p1@ENSMUST00000136302 |
9.21e-50 | FFCP PHASE1:Mm9::chr6:51009701..51009744,-#_75845dcde6fb71066e7aac0bb862a527 | p@chr6:51009701..51009744, - |
9.21e-50 | FFCP PHASE2:Mm9::chr6:51009701..51009744,-#_75845dcde6fb71066e7aac0bb862a527 | p@chr6:51009701..51009744, - |
2.92e-48 | FFCP PHASE1:Mm9::chr10:97069737..97069749,+#_f535a560ec87a2ff8b7a9fd2cb09efa3 | p5@Kera |
2.92e-48 | FFCP PHASE2:Mm9::chr10:97069737..97069749,+#_f535a560ec87a2ff8b7a9fd2cb09efa3 | p5@Kera |
4.71e-48 | FFCP PHASE1:Mm9::chr6:52210816..52210831,-#_98cebc32fe6151d0ba23bcd9f4b51727 | p2@Hoxa13 |
4.71e-48 | FFCP PHASE2:Mm9::chr6:52210816..52210831,-#_98cebc32fe6151d0ba23bcd9f4b51727 | p2@Hoxa13 |
6.47e-48 | FFCP PHASE1:Mm9::chr2:74513149..74513159,+#_65afddc71df64195f4c73055756ee429 | p@chr2:74513149..74513159, + |
6.47e-48 | FFCP PHASE2:Mm9::chr2:74513149..74513159,+#_65afddc71df64195f4c73055756ee429 | p@chr2:74513149..74513159, + |
1.4e-44 | FFCP PHASE2:Mm9::chr1:165288513..165288518,+#_20e38d848bfb14fe0cd2e0ab448ccb3e | p@chr1:165288513..165288518, + |
1.4e-44 | FFCP PHASE1:Mm9::chr1:165288513..165288518,+#_20e38d848bfb14fe0cd2e0ab448ccb3e | p@chr1:165288513..165288518, + |
2.07e-41 | FFCP PHASE1:Mm9::chr1:164064835..164064864,-#_6468e6a952f30f862b69d45a42534855 | p3@Dnm3 |
2.07e-41 | FFCP PHASE2:Mm9::chr1:164064835..164064864,-#_6468e6a952f30f862b69d45a42534855 | p3@Dnm3 |
2.91e-40 | FFCP PHASE2:Mm9::chr2:33574267..33574279,-#_cf090ac862f063d7337535027f9b7ebf | p1@ENSMUST00000130532 |
2.91e-40 | FFCP PHASE1:Mm9::chr2:33574267..33574279,-#_cf090ac862f063d7337535027f9b7ebf | p1@ENSMUST00000130532 |
3.67e-40 | FFCP PHASE2:Mm9::chr2:33574309..33574319,-#_407a542867de5283f28f00fca9b09cf0 | p4@ENSMUST00000130532 |
3.67e-40 | FFCP PHASE1:Mm9::chr2:33574309..33574319,-#_407a542867de5283f28f00fca9b09cf0 | p4@ENSMUST00000130532 |
5.46e-39 | FFCP PHASE2:Mm9::chr6:52195000..52195013,+#_7c70997785a5f0c0768529b863c560fd | p3@Hoxa11as |
5.46e-39 | FFCP PHASE1:Mm9::chr6:52195000..52195013,+#_7c70997785a5f0c0768529b863c560fd | p3@Hoxa11as |
6.59e-38 | FFCP PHASE2:Mm9::chr2:74512009..74512012,+#_8c59ed92264d2cc6b76b55fef32526f6 | p@chr2:74512009..74512012, + |
6.59e-38 | FFCP PHASE1:Mm9::chr2:74512009..74512012,+#_8c59ed92264d2cc6b76b55fef32526f6 | p@chr2:74512009..74512012, + |
1.94e-35 | FFCP PHASE2:Mm9::chr2:33496847..33496857,+#_c4ee3df0f15550b3ceee2e3f0b4ef4bc | p3@ENSMUST00000147294, p3@uc008jia.1 |
1.94e-35 | FFCP PHASE1:Mm9::chr2:33496847..33496857,+#_c4ee3df0f15550b3ceee2e3f0b4ef4bc | p3@ENSMUST00000147294, p3@uc008jia.1 |
9.74e-35 | FFCP PHASE1:Mm9::chr13:89680110..89680115,+#_5742e7fc09cc8d8631cbfa474a4321dc | p6@Hapln1 |
9.74e-35 | FFCP PHASE2:Mm9::chr13:89680110..89680115,+#_5742e7fc09cc8d8631cbfa474a4321dc | p6@Hapln1 |
2.95e-34 | FFCP PHASE2:Mm9::chr9:96754986..96754989,-#_806e0a6d43f550407a3e1d793f359b66 | p3@Acpl2 |
2.95e-34 | FFCP PHASE1:Mm9::chr9:96754986..96754989,-#_806e0a6d43f550407a3e1d793f359b66 | p3@Acpl2 |
6.28e-34 | FFCP PHASE2:Mm9::chr8:23734491..23734495,+#_4fb2a7c9707f6202867ca8d974feccc0 | p1@Dkk4 |
6.28e-34 | FFCP PHASE1:Mm9::chr8:23734491..23734495,+#_4fb2a7c9707f6202867ca8d974feccc0 | p1@Dkk4 |
7.62e-34 | FFCP PHASE1:Mm9::chr2:155770985..155770995,-#_26e52ffd228c5c5532d0b97f64a46c6c | p2@Gdf5 |
7.62e-34 | FFCP PHASE2:Mm9::chr2:155770985..155770995,-#_26e52ffd228c5c5532d0b97f64a46c6c | p2@Gdf5 |
2.0e-33 | FFCP PHASE2:Mm9::chr18:80910310..80910329,-#_960ca435997f1a06b6bcc7d1bd33a899 | p@chr18:80910310..80910329, - |
2.0e-33 | FFCP PHASE1:Mm9::chr18:80910310..80910329,-#_960ca435997f1a06b6bcc7d1bd33a899 | p@chr18:80910310..80910329, - |
1.89e-32 | FFCP PHASE2:Mm9::chr6:52210774..52210787,-#_d7ae9901c26ee9ef1e66e31c0728f48e | p1@Hoxa13 |
1.89e-32 | FFCP PHASE1:Mm9::chr6:52210774..52210787,-#_d7ae9901c26ee9ef1e66e31c0728f48e | p1@Hoxa13 |
6.43e-32 | FFCP PHASE2:Mm9::chr2:33498116..33498124,+#_c2c27d1e59c937731f68c5fea537aaa3 | p@chr2:33498116..33498124, + |
6.43e-32 | FFCP PHASE1:Mm9::chr2:33498116..33498124,+#_c2c27d1e59c937731f68c5fea537aaa3 | p@chr2:33498116..33498124, + |
7.44e-32 | FFCP PHASE2:Mm9::chr2:33496574..33496588,+#_c6978af42d3deaddb84d54248a6aca45 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
7.44e-32 | FFCP PHASE1:Mm9::chr2:33496574..33496588,+#_c6978af42d3deaddb84d54248a6aca45 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
1.09e-30 | FFCP PHASE2:Mm9::chr2:74520075..74520087,+#_0255dc8efd1b8e37f3c7b91fe28ed866 | p6@Hoxd11 |
1.09e-30 | FFCP PHASE1:Mm9::chr2:74520075..74520087,+#_0255dc8efd1b8e37f3c7b91fe28ed866 | p6@Hoxd11 |
2.22e-30 | FFCP PHASE1:Mm9::chr12:34649201..34649205,+#_36e90950c22e14a13eb4c77717937058 | p@chr12:34649201..34649205, + |
2.22e-30 | FFCP PHASE2:Mm9::chr12:34649201..34649205,+#_36e90950c22e14a13eb4c77717937058 | p@chr12:34649201..34649205, + |
1.6e-29 | FFCP PHASE2:Mm9::chr5:120285104..120285113,+#_8e131bb673c371c077515a9c6d533f47 | p5@Tbx5 |
1.6e-29 | FFCP PHASE1:Mm9::chr5:120285104..120285113,+#_8e131bb673c371c077515a9c6d533f47 | p5@Tbx5 |
4.13e-29 | FFCP PHASE1:Mm9::chr5:120246556..120246565,+#_e26b41d17015e679cd6a0409497ae98a | p@chr5:120246556..120246565, + |
4.13e-29 | FFCP PHASE2:Mm9::chr5:120246556..120246565,+#_e26b41d17015e679cd6a0409497ae98a | p@chr5:120246556..120246565, + |
4.91e-29 | FFCP PHASE2:Mm9::chr5:120246522..120246553,+#_e129c6f94e91b5297bc7ae98810488ed | p@chr5:120246522..120246553, + |
4.91e-29 | FFCP PHASE1:Mm9::chr5:120246522..120246553,+#_e129c6f94e91b5297bc7ae98810488ed | p@chr5:120246522..120246553, + |
5.59e-29 | FFCP PHASE2:Mm9::chr16:77329743..77329754,+#_f710738b3571092e90623f064e34fa0c | p14@2810055G20Rik |
5.59e-29 | FFCP PHASE1:Mm9::chr16:77329743..77329754,+#_f710738b3571092e90623f064e34fa0c | p14@2810055G20Rik |
8.27e-29 | FFCP PHASE1:Mm9::chr3:29912310..29912321,-#_7848fe93286d0f4147259a69e27b4187 | p23@Mecom |
8.27e-29 | FFCP PHASE2:Mm9::chr3:29912310..29912321,-#_7848fe93286d0f4147259a69e27b4187 | p23@Mecom |
6.5e-28 | FFCP PHASE1:Mm9::chr3:99044251..99044260,+#_5825db1b00a41d4989534e250d1fdde9 | p8@Tbx15 |
6.5e-28 | FFCP PHASE2:Mm9::chr3:99044251..99044260,+#_5825db1b00a41d4989534e250d1fdde9 | p8@Tbx15 |
3.95e-27 | FFCP PHASE1:Mm9::chr15:97807283..97807309,-#_47922b095459e378e151c321c284f917 | p@chr15:97807283..97807309, - |
3.95e-27 | FFCP PHASE2:Mm9::chr15:97807283..97807309,-#_47922b095459e378e151c321c284f917 | p@chr15:97807283..97807309, - |
5.23e-27 | FFCP PHASE1:Mm9::chr1:165244244..165244254,-#_74d58d34def530cb6fc75b3a47b28db2 | p8@Prrx1 |
5.23e-27 | FFCP PHASE2:Mm9::chr1:165244244..165244254,-#_74d58d34def530cb6fc75b3a47b28db2 | p8@Prrx1 |
1.4e-26 | FFCP PHASE2:Mm9::chr5:42155277..42155281,-#_8f6a2eb24df77c1ca18a5f7b5db66259 | p2@Nkx3-2 |
1.4e-26 | FFCP PHASE1:Mm9::chr5:42155277..42155281,-#_8f6a2eb24df77c1ca18a5f7b5db66259 | p2@Nkx3-2 |
1.64e-26 | FFCP PHASE2:Mm9::chr16:95807232..95807250,-#_079d5a351fe426c10e8089b001d34971 | p@chr16:95807232..95807250, - |
1.64e-26 | FFCP PHASE1:Mm9::chr16:95807232..95807250,-#_079d5a351fe426c10e8089b001d34971 | p@chr16:95807232..95807250, - |
7.57e-26 | FFCP PHASE1:Mm9::chr3:86116124..86116132,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:86116124..86116132, + |
7.57e-26 | FFCP PHASE1:Mm9::chr4:125973415..125973418,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr4:125973415..125973418, + |
7.57e-26 | FFCP PHASE2:Mm9::chr3:86116124..86116132,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:86116124..86116132, + |
7.57e-26 | FFCP PHASE2:Mm9::chr4:125973415..125973418,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr4:125973415..125973418, + |
7.57e-26 | FFCP PHASE2:Mm9::chr3:37606335..37606337,-#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:37606335..37606337, - |
7.57e-26 | FFCP PHASE1:Mm9::chr3:37606335..37606337,-#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:37606335..37606337, - |
1.07e-25 | FFCP PHASE1:Mm9::chr17:68300324..68300336,-#_17a07503088e277c8c4c88516e18663e | p5@Arhgap28 |
1.07e-25 | FFCP PHASE2:Mm9::chr17:68300324..68300336,-#_17a07503088e277c8c4c88516e18663e | p5@Arhgap28 |
2.33e-25 | FFCP PHASE1:Mm9::chr7:75096968..75096978,+#_bcda3de63c0252a346aa0770d75d3a3f | p9@Igf1r |
2.33e-25 | FFCP PHASE2:Mm9::chr7:75096968..75096978,+#_bcda3de63c0252a346aa0770d75d3a3f | p9@Igf1r |
2.93e-25 | FFCP PHASE2:Mm9::chr15:101936581..101936594,+#_c5d02982519cf6c1d724b173427f6aa7 | p@chr15:101936581..101936594, + |
2.93e-25 | FFCP PHASE1:Mm9::chr15:101936581..101936594,+#_c5d02982519cf6c1d724b173427f6aa7 | p@chr15:101936581..101936594, + |
2.99e-25 | FFCP PHASE2:Mm9::chr17:23882313..23882330,-#_8313030b5d0b83ce249d108f61202ff0 | p@chr17:23882313..23882330, - |
2.99e-25 | FFCP PHASE1:Mm9::chr17:23882313..23882330,-#_8313030b5d0b83ce249d108f61202ff0 | p@chr17:23882313..23882330, - |
3.52e-25 | FFCP PHASE2:Mm9::chr2:155771018..155771042,-#_7feca5689396a266558283cfa70428fb | p1@Gdf5 |
3.52e-25 | FFCP PHASE1:Mm9::chr2:155771018..155771042,-#_7feca5689396a266558283cfa70428fb | p1@Gdf5 |
2.77e-24 | FFCP PHASE1:Mm9::chr15:77137392..77137399,-#_74ecbf71c40274e64452ea5113b0df61 | p16@Rbfox2 |
2.77e-24 | FFCP PHASE2:Mm9::chr15:77137392..77137399,-#_74ecbf71c40274e64452ea5113b0df61 | p16@Rbfox2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Upper limb, which connects the manus with the pectoral girdle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.