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UBERON:0002217

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Name:synovial joint
Namespace:FANTOM
Definition:"Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA]" [FMA:FMA, Wikipedia:Synovial_joint]
Xrefs:
links:

AEO:0000183
EHDAA2:0003183
FMA:7501
galen:SynovialJoint
MA:0000322
OpenCyc:Mx4rv2bBV5wpEbGdrcN5Y29ycA
SCTID:113234001
TAO:0005153

ZFA:0005153
Synonyms: "articulatio synoviale" EXACT []
"diarthrodial joints" RELATED [ZFA:0005153]
"diarthroses" EXACT [ZFA:0005153]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7501-MA_0000322
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000982(skeletal joint)
disjoint_from:UBERON:0011134(nonsynovial joint)



Children

is a:UBERON:0011139 (synovial limb joint)
part of:UBERON:0002018 (synovial membrane of synovial joint)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002217 (synovial joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
6.24e-88FFCP PHASE2:Hg19::chr7:80546293..80546302,-#_5a0289455d8d19a912b48fd6989a118ep31@SEMA3C
6.24e-88FFCP PHASE1:Hg19::chr7:80546293..80546302,-#_5a0289455d8d19a912b48fd6989a118ep31@SEMA3C
1.71e-66FFCP PHASE2:Hg19::chr18:22150956..22150983,+#_925bce1c50c83f347524907635604138p@chr18:22150956..22150983, +
1.71e-66FFCP PHASE1:Hg19::chr18:22150956..22150983,+#_925bce1c50c83f347524907635604138p@chr18:22150956..22150983, +
2.39e-66FFCP PHASE1:Hg19::chr1:172134667..172134711,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134667..172134711, +
2.39e-66FFCP PHASE1:Hg19::chr2:181751144..181751146,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr2:181751144..181751146, +
2.39e-66FFCP PHASE1:Hg19::chr1:172134736..172134739,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134736..172134739, +
2.39e-66FFCP PHASE1:Hg19::chr12:130786785..130786827,-#_2863efd0810ef354f5e9b9f30e442fd5p@chr12:130786785..130786827, -
2.39e-66FFCP PHASE2:Hg19::chr2:181751144..181751146,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr2:181751144..181751146, +
2.39e-66FFCP PHASE1:Hg19::chr8:37411632..37411639,-#_2863efd0810ef354f5e9b9f30e442fd5p1@ENST00000517363
2.39e-66FFCP PHASE2:Hg19::chr1:172134667..172134711,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134667..172134711, +
2.39e-66FFCP PHASE1:Hg19::chr1:172134755..172134764,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134755..172134764, +
2.39e-66FFCP PHASE1:Hg19::chr15:68117826..68117829,+#_2863efd0810ef354f5e9b9f30e442fd5p9@SKOR1
2.39e-66FFCP PHASE2:Hg19::chr1:172134736..172134739,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134736..172134739, +
2.39e-66FFCP PHASE2:Hg19::chr8:37411632..37411639,-#_2863efd0810ef354f5e9b9f30e442fd5p1@ENST00000517363
2.39e-66FFCP PHASE2:Hg19::chr15:68117826..68117829,+#_2863efd0810ef354f5e9b9f30e442fd5p9@SKOR1
2.39e-66FFCP PHASE2:Hg19::chr12:130786785..130786827,-#_2863efd0810ef354f5e9b9f30e442fd5p@chr12:130786785..130786827, -
2.39e-66FFCP PHASE2:Hg19::chr1:172134755..172134764,+#_2863efd0810ef354f5e9b9f30e442fd5p@chr1:172134755..172134764, +
1.68e-53FFCP PHASE1:Hg19::chr8:25337208..25337219,+#_cdc4c9d69c1aeacf58ad4b4221c4bd3ep5@CDCA2
1.68e-53FFCP PHASE2:Hg19::chr8:25337208..25337219,+#_cdc4c9d69c1aeacf58ad4b4221c4bd3ep5@CDCA2
2.19e-53FFCP PHASE2:Hg19::chr2:242009429..242009432,+#_8171679aff5cf3915616f6214e7b590bp@chr2:242009429..242009432, +
2.19e-53FFCP PHASE1:Hg19::chr2:242009429..242009432,+#_8171679aff5cf3915616f6214e7b590bp@chr2:242009429..242009432, +
2.87e-53FFCP PHASE1:Hg19::chr12:131476821..131476831,-#_ea6854d8f30f6f713887befc5fac7865p@chr12:131476821..131476831, -
2.87e-53FFCP PHASE2:Hg19::chr12:131476821..131476831,-#_ea6854d8f30f6f713887befc5fac7865p@chr12:131476821..131476831, -
1.22e-44FFCP PHASE1:Hg19::chrY:58884631..58884640,+#_1ef41a1868ddbaa67ce87542c979c222p@chrY:58884631..58884640, +
1.22e-44FFCP PHASE2:Hg19::chrY:58884631..58884640,+#_1ef41a1868ddbaa67ce87542c979c222p@chrY:58884631..58884640, +
1.8e-38FFCP PHASE1:Hg19::chr1:142537706..142537723,-#_3efc4d95bcbdf7650a7ee7aff4931574p@chr1:142537706..142537723, -
1.8e-38FFCP PHASE2:Hg19::chr1:142537706..142537723,-#_3efc4d95bcbdf7650a7ee7aff4931574p@chr1:142537706..142537723, -
1.85e-36FFCP PHASE1:Hg19::chr10:131634104..131634108,-#_2940836afe2c1874cc773c8a69670b27p@chr10:131634104..131634108, -
1.85e-36FFCP PHASE2:Hg19::chr10:131634104..131634108,-#_2940836afe2c1874cc773c8a69670b27p@chr10:131634104..131634108, -
3.33e-34FFCP PHASE1:Hg19::chr17:9066265..9066271,+#_035d956fd1107ec26bd8292ef1497343p@chr17:9066265..9066271, +
3.33e-34FFCP PHASE2:Hg19::chr17:9066265..9066271,+#_035d956fd1107ec26bd8292ef1497343p@chr17:9066265..9066271, +
4.27e-34FFCP PHASE2:Hg19::chr12:54379011..54379016,+#_fea9c771e19c9d71b56304f7fbf4b149p15@HOXC10
4.27e-34FFCP PHASE2:Hg19::chr10:135140510..135140524,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr10:135140510..135140524, -
4.27e-34FFCP PHASE1:Hg19::chr15:68118244..68118272,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68118244..68118272, +
4.27e-34FFCP PHASE2:Hg19::chr12:130646534..130646542,+#_fea9c771e19c9d71b56304f7fbf4b149p5@FZD10
4.27e-34FFCP PHASE1:Hg19::chr8:78774585..78774589,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr8:78774585..78774589, -
4.27e-34FFCP PHASE1:Hg19::chr5:1043105..1043109,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr5:1043105..1043109, +
4.27e-34FFCP PHASE1:Hg19::chr12:54379011..54379016,+#_fea9c771e19c9d71b56304f7fbf4b149p15@HOXC10
4.27e-34FFCP PHASE2:Hg19::chr15:68118244..68118272,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68118244..68118272, +
4.27e-34FFCP PHASE1:Hg19::chr12:91435143..91435151,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr12:91435143..91435151, -
4.27e-34FFCP PHASE1:Hg19::chr10:135140510..135140524,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr10:135140510..135140524, -
4.27e-34FFCP PHASE2:Hg19::chr8:78774585..78774589,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr8:78774585..78774589, -
4.27e-34FFCP PHASE1:Hg19::chr15:68124311..68124318,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68124311..68124318, +
4.27e-34FFCP PHASE1:Hg19::chr8:37411648..37411657,-#_fea9c771e19c9d71b56304f7fbf4b149p1@ENST00000519738
4.27e-34FFCP PHASE1:Hg19::chr4:139010162..139010169,+#_fea9c771e19c9d71b56304f7fbf4b149p1@LOC641364
4.27e-34FFCP PHASE1:Hg19::chr12:130646534..130646542,+#_fea9c771e19c9d71b56304f7fbf4b149p5@FZD10
4.27e-34FFCP PHASE2:Hg19::chr5:1043105..1043109,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr5:1043105..1043109, +
4.27e-34FFCP PHASE2:Hg19::chr12:91435143..91435151,-#_fea9c771e19c9d71b56304f7fbf4b149p@chr12:91435143..91435151, -
4.27e-34FFCP PHASE2:Hg19::chr8:37411648..37411657,-#_fea9c771e19c9d71b56304f7fbf4b149p1@ENST00000519738
4.27e-34FFCP PHASE2:Hg19::chr15:68124311..68124318,+#_fea9c771e19c9d71b56304f7fbf4b149p@chr15:68124311..68124318, +
4.27e-34FFCP PHASE2:Hg19::chr4:139010162..139010169,+#_fea9c771e19c9d71b56304f7fbf4b149p1@LOC641364
5.51e-34FFCP PHASE2:Hg19::chr15:89402148..89402159,+#_036fca98bec9de066e88d9dec56f20ccp6@ACAN
5.51e-34FFCP PHASE1:Hg19::chr15:89402148..89402159,+#_036fca98bec9de066e88d9dec56f20ccp6@ACAN
5.96e-34FFCP PHASE2:Hg19::chr15:68117844..68117858,+#_e29461d5ab8121d5ee8bc4172d448ba5p3@SKOR1
5.96e-34FFCP PHASE1:Hg19::chr6:42072877..42072881,-#_e29461d5ab8121d5ee8bc4172d448ba5p11@C6orf132
5.96e-34FFCP PHASE2:Hg19::chr12:54366780..54366791,+#_e29461d5ab8121d5ee8bc4172d448ba5p12@HOXC11
5.96e-34FFCP PHASE1:Hg19::chr13:73102090..73102097,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr13:73102090..73102097, -
5.96e-34FFCP PHASE2:Hg19::chr17:63705566..63705573,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr17:63705566..63705573, -
5.96e-34FFCP PHASE2:Hg19::chr1:172145683..172145699,+#_e29461d5ab8121d5ee8bc4172d448ba5p@chr1:172145683..172145699, +
5.96e-34FFCP PHASE2:Hg19::chr6:42072877..42072881,-#_e29461d5ab8121d5ee8bc4172d448ba5p11@C6orf132
5.96e-34FFCP PHASE1:Hg19::chr12:54366780..54366791,+#_e29461d5ab8121d5ee8bc4172d448ba5p12@HOXC11
5.96e-34FFCP PHASE2:Hg19::chr13:73102090..73102097,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr13:73102090..73102097, -
5.96e-34FFCP PHASE1:Hg19::chr15:68117844..68117858,+#_e29461d5ab8121d5ee8bc4172d448ba5p3@SKOR1
5.96e-34FFCP PHASE1:Hg19::chr17:63705566..63705573,-#_e29461d5ab8121d5ee8bc4172d448ba5p@chr17:63705566..63705573, -
5.96e-34FFCP PHASE1:Hg19::chr1:172145683..172145699,+#_e29461d5ab8121d5ee8bc4172d448ba5p@chr1:172145683..172145699, +
7.7e-34FFCP PHASE1:Hg19::chrY:13450855..13450866,+#_21b137d17d95dff0b0c3161fc4b53c79p@chrY:13450855..13450866, +
7.7e-34FFCP PHASE2:Hg19::chrY:13450855..13450866,+#_21b137d17d95dff0b0c3161fc4b53c79p@chrY:13450855..13450866, +
1.46e-31FFCP PHASE2:Hg19::chr19:18718172..18718197,+#_f1307c9e9b4a94e6b777993626e3cd5fp@chr19:18718172..18718197, +
1.46e-31FFCP PHASE1:Hg19::chr19:18718172..18718197,+#_f1307c9e9b4a94e6b777993626e3cd5fp@chr19:18718172..18718197, +
1.71e-30FFCP PHASE2:Hg19::chr21:39821025..39821046,-#_ced81508a1f613c2ebdc641b145c65e0p9@ERG
1.71e-30FFCP PHASE1:Hg19::chr21:39821025..39821046,-#_ced81508a1f613c2ebdc641b145c65e0p9@ERG
2.3e-30FFCP PHASE1:Hg19::chr1:186273262..186273282,+#_f421973e7e30941bdef7396c42be9db7p@chr1:186273262..186273282, +
2.3e-30FFCP PHASE1:Hg19::chr15:89402048..89402061,+#_f421973e7e30941bdef7396c42be9db7p8@ACAN
2.3e-30FFCP PHASE2:Hg19::chr15:89402048..89402061,+#_f421973e7e30941bdef7396c42be9db7p8@ACAN
2.3e-30FFCP PHASE2:Hg19::chr1:186273262..186273282,+#_f421973e7e30941bdef7396c42be9db7p@chr1:186273262..186273282, +
7.54e-30FFCP PHASE2:Hg19::chr1:186276427..186276448,+#_696f002dfc2d36807beacb4d1336c060p@chr1:186276427..186276448, +
7.54e-30FFCP PHASE1:Hg19::chr1:186276427..186276448,+#_696f002dfc2d36807beacb4d1336c060p@chr1:186276427..186276448, +
8.12e-28FFCP PHASE1:Hg19::chr7:80373118..80373135,-#_3c683c38308d3ff2d42c09b98a2e8b2cp21@SEMA3C
8.12e-28FFCP PHASE2:Hg19::chr7:80373118..80373135,-#_3c683c38308d3ff2d42c09b98a2e8b2cp21@SEMA3C
1.39e-27FFCP PHASE1:Hg19::chr20:48160907..48160918,-#_e5252239089c4ef70f3f2a5cfc364ab5p@chr20:48160907..48160918, -
1.39e-27FFCP PHASE2:Hg19::chr20:48160907..48160918,-#_e5252239089c4ef70f3f2a5cfc364ab5p@chr20:48160907..48160918, -
1.82e-27FFCP PHASE1:Hg19::chr20:43343646..43343655,+#_6dc6e9dca7bbc0223be86e64f2352bb3p7@WISP2
1.82e-27FFCP PHASE1:Hg19::chr3:156877038..156877058,-#_6dc6e9dca7bbc0223be86e64f2352bb3p35@CCNL1
1.82e-27FFCP PHASE2:Hg19::chr20:43343646..43343655,+#_6dc6e9dca7bbc0223be86e64f2352bb3p7@WISP2
1.82e-27FFCP PHASE2:Hg19::chr3:156877038..156877058,-#_6dc6e9dca7bbc0223be86e64f2352bb3p35@CCNL1
1.82e-27FFCP PHASE1:Hg19::chr1:142537912..142537938,-#_6dc6e9dca7bbc0223be86e64f2352bb3p@chr1:142537912..142537938, -
1.82e-27FFCP PHASE2:Hg19::chr1:142537912..142537938,-#_6dc6e9dca7bbc0223be86e64f2352bb3p@chr1:142537912..142537938, -
2.08e-27FFCP PHASE2:Hg19::chr1:142539672..142539687,-#_6a614aeb07ef61a3261623017e405403p@chr1:142539672..142539687, -
2.08e-27FFCP PHASE2:Hg19::chr6:1609602..1609636,-#_6a614aeb07ef61a3261623017e405403p@chr6:1609602..1609636, -
2.08e-27FFCP PHASE1:Hg19::chr1:142539672..142539687,-#_6a614aeb07ef61a3261623017e405403p@chr1:142539672..142539687, -
2.08e-27FFCP PHASE1:Hg19::chr6:1609602..1609636,-#_6a614aeb07ef61a3261623017e405403p@chr6:1609602..1609636, -
2.38e-27FFCP PHASE1:Hg19::chr21:39705323..39705334,-#_105613a74b9f5af567c64232d0799988p2@ENST00000436845
2.38e-27FFCP PHASE2:Hg19::chr21:39705323..39705334,-#_105613a74b9f5af567c64232d0799988p2@ENST00000436845
3.11e-27FFCP PHASE1:Hg19::chr6:31918397..31918412,+#_8649b4adbb9d8e75df39579521e6114cp15@CFB
3.11e-27FFCP PHASE2:Hg19::chr6:31918397..31918412,+#_8649b4adbb9d8e75df39579521e6114cp15@CFB
3.11e-27FFCP PHASE1:Hg19::chr16:15680784..15680797,+#_8649b4adbb9d8e75df39579521e6114cp@chr16:15680784..15680797, +
3.11e-27FFCP PHASE2:Hg19::chr16:15680784..15680797,+#_8649b4adbb9d8e75df39579521e6114cp@chr16:15680784..15680797, +
4.07e-27FFCP PHASE1:Hg19::chr8:70476088..70476102,+#_eeeaf0cca10a46cc32759a3130e8754ep21@SULF1
4.07e-27FFCP PHASE2:Hg19::chr8:70476088..70476102,+#_eeeaf0cca10a46cc32759a3130e8754ep21@SULF1










Property "Property value" (as page type) with input value "UBPROP:0000001 "Is a joint that is located at the point of contact of articulating bones allowing movement. The joint has a capsule containing synovial fluid surrounding the articulating bone surfaces.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.