Personal tools

UBERON:0002456

From FANTOM5_SSTAR

Revision as of 17:32, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:internal thoracic artery
Namespace:FANTOM
Definition:"In human anatomy, the internal thoracic artery (ITA), previously known as the internal mammary artery (a name still common among surgeons), is an artery that supplies the anterior chest wall and the breasts. It is a paired artery, with one running along each side of the sternum, to continue after its bifurcation as the superior epigastric and musculophrenic arteries. [WP,unvetted]." [Wikipedia:Internal_thoracic_artery]
Xrefs:
links:

EHDAA2:0000880
EHDAA:8585
EMAPA:18617
FMA:3960
[ Gray522.png Gray522.png]
MA:0001982
MA:0001984
ncithesaurus:Internal_Mammary_Artery
OpenCyc:Mx4rMe0MIao8EduQrwACs5b6Bw

SCTID:244239009
Synonyms: "arteria thoracica interna, arteria mammaria interna" RELATED LATIN [Wikipedia:Internal_thoracic_artery]
"internal mammary artery" EXACT ATTRIBUTION_REQUIRED [MA:0001982]
"internal thoracic mammary artery" EXACT []
Comments:note MA has both mammary and thoracic
Alt_id: UBERON:MA_0001984-FMA_3960
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004573(systemic artery)
part_of:UBERON:0001533(subclavian artery)



Children

part of:CL:0002593 (smooth muscle cell of the internal thoracic artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002456 (internal thoracic artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
4.52e-50FFCP PHASE1:Hg19::chr20:7755823..7755848,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr20:7755823..7755848, -
4.52e-50FFCP PHASE2:Hg19::chr1:156697077..156697084,-#_dd4b3e431a7cf83acb23013c63baf49ap11@ISG20L2
4.52e-50FFCP PHASE1:Hg19::chr9:33798017..33798022,+#_dd4b3e431a7cf83acb23013c63baf49ap8@PRSS3
4.52e-50FFCP PHASE2:Hg19::chr1:215257098..215257110,+#_dd4b3e431a7cf83acb23013c63baf49ap@chr1:215257098..215257110, +
4.52e-50FFCP PHASE1:Hg19::chr3:168864427..168864464,-#_dd4b3e431a7cf83acb23013c63baf49ap19@MECOM
4.52e-50FFCP PHASE1:Hg19::chr6:56507200..56507216,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr6:56507200..56507216, -
4.52e-50FFCP PHASE2:Hg19::chr5:149900740..149900745,+#_dd4b3e431a7cf83acb23013c63baf49ap32@NDST1
4.52e-50FFCP PHASE2:Hg19::chr16:73094120..73094122,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr16:73094120..73094122, -
4.52e-50FFCP PHASE1:Hg19::chr1:156697077..156697084,-#_dd4b3e431a7cf83acb23013c63baf49ap11@ISG20L2
4.52e-50FFCP PHASE1:Hg19::chr16:73094120..73094122,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr16:73094120..73094122, -
4.52e-50FFCP PHASE1:Hg19::chr1:215257098..215257110,+#_dd4b3e431a7cf83acb23013c63baf49ap@chr1:215257098..215257110, +
4.52e-50FFCP PHASE2:Hg19::chr17:40025761..40025768,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr17:40025761..40025768, -
4.52e-50FFCP PHASE2:Hg19::chr20:7755823..7755848,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr20:7755823..7755848, -
4.52e-50FFCP PHASE2:Hg19::chr9:33798017..33798022,+#_dd4b3e431a7cf83acb23013c63baf49ap8@PRSS3
4.52e-50FFCP PHASE1:Hg19::chr5:149900740..149900745,+#_dd4b3e431a7cf83acb23013c63baf49ap32@NDST1
4.52e-50FFCP PHASE2:Hg19::chr3:168864427..168864464,-#_dd4b3e431a7cf83acb23013c63baf49ap19@MECOM
4.52e-50FFCP PHASE1:Hg19::chr17:40025761..40025768,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr17:40025761..40025768, -
4.52e-50FFCP PHASE2:Hg19::chr6:56507200..56507216,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr6:56507200..56507216, -
4.52e-50FFCP PHASE2:Hg19::chr10:4822941..4822949,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr10:4822941..4822949, -
4.52e-50FFCP PHASE1:Hg19::chr10:4822941..4822949,-#_dd4b3e431a7cf83acb23013c63baf49ap@chr10:4822941..4822949, -
1.64e-40FFCP PHASE2:Hg19::chr7:93519591..93519595,-#_ebc1277c31c4d17267a7c5a72e294021p9@TFPI2
1.64e-40FFCP PHASE1:Hg19::chr7:93519591..93519595,-#_ebc1277c31c4d17267a7c5a72e294021p9@TFPI2
1.89e-37FFCP PHASE1:Hg19::chr2:161237614..161237627,-#_a96a032b034169b1f3088a7e8819ead0p@chr2:161237614..161237627, -
1.89e-37FFCP PHASE2:Hg19::chr2:161237614..161237627,-#_a96a032b034169b1f3088a7e8819ead0p@chr2:161237614..161237627, -
6.83e-37FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_d13443e5760c8ccbe4d04ef798328ba0p@chr9:3898804..3898817, -
6.83e-37FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_d13443e5760c8ccbe4d04ef798328ba0p@chr9:3898804..3898817, -
2.45e-36FFCP PHASE2:Hg19::chr9:3898831..3898843,-#_204f675265ca13e97c8e2e71eba8788ap@chr9:3898831..3898843, -
2.45e-36FFCP PHASE1:Hg19::chr9:3898831..3898843,-#_204f675265ca13e97c8e2e71eba8788ap@chr9:3898831..3898843, -
3.61e-34FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_e201a8f5f40a9c652a844772b229a5ddp@chr3:156258392..156258395, -
3.61e-34FFCP PHASE2:Hg19::chr17:75405541..75405547,-#_e201a8f5f40a9c652a844772b229a5ddp@chr17:75405541..75405547, -
3.61e-34FFCP PHASE2:Hg19::chr10:14457224..14457226,+#_e201a8f5f40a9c652a844772b229a5ddp@chr10:14457224..14457226, +
3.61e-34FFCP PHASE1:Hg19::chr10:14457224..14457226,+#_e201a8f5f40a9c652a844772b229a5ddp@chr10:14457224..14457226, +
3.61e-34FFCP PHASE1:Hg19::chr17:75405541..75405547,-#_e201a8f5f40a9c652a844772b229a5ddp@chr17:75405541..75405547, -
3.61e-34FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_e201a8f5f40a9c652a844772b229a5ddp@chr3:156258392..156258395, -
5.04e-34FFCP PHASE1:Hg19::chr4:120446538..120446544,-#_4f009c3a4aafad2593ade199b8f46bfap@chr4:120446538..120446544, -
5.04e-34FFCP PHASE2:Hg19::chr4:120446538..120446544,-#_4f009c3a4aafad2593ade199b8f46bfap@chr4:120446538..120446544, -
5.04e-34FFCP PHASE2:Hg19::chr11:6423953..6423960,-#_4f009c3a4aafad2593ade199b8f46bfap19@APBB1
5.04e-34FFCP PHASE1:Hg19::chr11:6423953..6423960,-#_4f009c3a4aafad2593ade199b8f46bfap19@APBB1
7.05e-34FFCP PHASE2:Hg19::chr14:24664018..24664052,+#_6606b4d93dfb0d9e09380fa9478878fap@chr14:24664018..24664052, +
7.05e-34FFCP PHASE2:Hg19::chr11:29328382..29328391,+#_6606b4d93dfb0d9e09380fa9478878fap@chr11:29328382..29328391, +
7.05e-34FFCP PHASE1:Hg19::chr1:205264274..205264298,-#_6606b4d93dfb0d9e09380fa9478878fap@chr1:205264274..205264298, -
7.05e-34FFCP PHASE1:Hg19::chr11:29328382..29328391,+#_6606b4d93dfb0d9e09380fa9478878fap@chr11:29328382..29328391, +
7.05e-34FFCP PHASE1:Hg19::chr14:24664018..24664052,+#_6606b4d93dfb0d9e09380fa9478878fap@chr14:24664018..24664052, +
7.05e-34FFCP PHASE2:Hg19::chr12:88782727..88782732,-#_6606b4d93dfb0d9e09380fa9478878fap@chr12:88782727..88782732, -
7.05e-34FFCP PHASE2:Hg19::chr13:33498605..33498607,-#_6606b4d93dfb0d9e09380fa9478878fap@chr13:33498605..33498607, -
7.05e-34FFCP PHASE1:Hg19::chr1:25046857..25046871,+#_6606b4d93dfb0d9e09380fa9478878fap@chr1:25046857..25046871, +
7.05e-34FFCP PHASE2:Hg19::chr7:134328418..134328421,+#_6606b4d93dfb0d9e09380fa9478878fap@chr7:134328418..134328421, +
7.05e-34FFCP PHASE2:Hg19::chr13:61626552..61626556,-#_6606b4d93dfb0d9e09380fa9478878fap@chr13:61626552..61626556, -
7.05e-34FFCP PHASE1:Hg19::chr13:61626552..61626556,-#_6606b4d93dfb0d9e09380fa9478878fap@chr13:61626552..61626556, -
7.05e-34FFCP PHASE1:Hg19::chr12:88782727..88782732,-#_6606b4d93dfb0d9e09380fa9478878fap@chr12:88782727..88782732, -
7.05e-34FFCP PHASE2:Hg19::chr6:33288524..33288536,-#_6606b4d93dfb0d9e09380fa9478878fap19@DAXX
7.05e-34FFCP PHASE1:Hg19::chr13:33498605..33498607,-#_6606b4d93dfb0d9e09380fa9478878fap@chr13:33498605..33498607, -
7.05e-34FFCP PHASE2:Hg19::chr1:120285422..120285431,+#_6606b4d93dfb0d9e09380fa9478878fap10@PHGDH
7.05e-34FFCP PHASE2:Hg19::chr10:112206899..112206910,-#_6606b4d93dfb0d9e09380fa9478878fap@chr10:112206899..112206910, -
7.05e-34FFCP PHASE1:Hg19::chr10:112206899..112206910,-#_6606b4d93dfb0d9e09380fa9478878fap@chr10:112206899..112206910, -
7.05e-34FFCP PHASE2:Hg19::chr1:205264274..205264298,-#_6606b4d93dfb0d9e09380fa9478878fap@chr1:205264274..205264298, -
7.05e-34FFCP PHASE1:Hg19::chr7:134328418..134328421,+#_6606b4d93dfb0d9e09380fa9478878fap@chr7:134328418..134328421, +
7.05e-34FFCP PHASE1:Hg19::chr6:33288524..33288536,-#_6606b4d93dfb0d9e09380fa9478878fap19@DAXX
7.05e-34FFCP PHASE2:Hg19::chr1:25046857..25046871,+#_6606b4d93dfb0d9e09380fa9478878fap@chr1:25046857..25046871, +
7.05e-34FFCP PHASE1:Hg19::chr1:120285422..120285431,+#_6606b4d93dfb0d9e09380fa9478878fap10@PHGDH
1.64e-33FFCP PHASE2:Hg19::chr12:63025600..63025629,+#_eda8da81f9509108ee49dbd2cb3f0646p@chr12:63025600..63025629, +
1.64e-33FFCP PHASE1:Hg19::chr12:63025600..63025629,+#_eda8da81f9509108ee49dbd2cb3f0646p@chr12:63025600..63025629, +
3.59e-26FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_7eca02f0c1bf043d3e5bcfd343a8e8ccp@chr11:102668160..102668174, +
3.59e-26FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_7eca02f0c1bf043d3e5bcfd343a8e8ccp@chr11:102668160..102668174, +
4.08e-26FFCP PHASE1:Hg19::chr22:30639183..30639188,-#_1b490ae99b37402e13d82f08640a7006p@chr22:30639183..30639188, -
4.08e-26FFCP PHASE2:Hg19::chr22:30639183..30639188,-#_1b490ae99b37402e13d82f08640a7006p@chr22:30639183..30639188, -
4.32e-26FFCP PHASE2:Hg19::chr2:239336125..239336130,-#_18a072c397e6ade9ef130127dd21dc0bp@chr2:239336125..239336130, -
4.32e-26FFCP PHASE1:Hg19::chr2:239336125..239336130,-#_18a072c397e6ade9ef130127dd21dc0bp@chr2:239336125..239336130, -
9.18e-26FFCP PHASE2:Hg19::chr7:4722287..4722294,+#_694e90699b02ae7d6a812419c9076afap9@FOXK1
9.18e-26FFCP PHASE1:Hg19::chr17:48625415..48625430,+#_694e90699b02ae7d6a812419c9076afap5@SPATA20
9.18e-26FFCP PHASE1:Hg19::chr16:30440504..30440514,-#_694e90699b02ae7d6a812419c9076afap@chr16:30440504..30440514, -
9.18e-26FFCP PHASE1:Hg19::chr9:107754023..107754028,-#_694e90699b02ae7d6a812419c9076afap5@ENST00000457720
9.18e-26FFCP PHASE1:Hg19::chr3:120188917..120188936,+#_694e90699b02ae7d6a812419c9076afap@chr3:120188917..120188936, +
9.18e-26FFCP PHASE1:Hg19::chr19:10654854..10654878,+#_694e90699b02ae7d6a812419c9076afap3@ATG4D
9.18e-26FFCP PHASE1:Hg19::chr2:220548381..220548386,+#_694e90699b02ae7d6a812419c9076afap@chr2:220548381..220548386, +
9.18e-26FFCP PHASE1:Hg19::chr4:74765097..74765105,-#_694e90699b02ae7d6a812419c9076afap@chr4:74765097..74765105, -
9.18e-26FFCP PHASE2:Hg19::chr3:5059566..5059575,-#_694e90699b02ae7d6a812419c9076afap@chr3:5059566..5059575, -
9.18e-26FFCP PHASE2:Hg19::chr19:19626515..19626522,+#_694e90699b02ae7d6a812419c9076afap3@NDUFA13
9.18e-26FFCP PHASE1:Hg19::chr19:18543503..18543510,+#_694e90699b02ae7d6a812419c9076afap@chr19:18543503..18543510, +
9.18e-26FFCP PHASE2:Hg19::chr14:74417096..74417108,-#_694e90699b02ae7d6a812419c9076afap5@FAM161B
9.18e-26FFCP PHASE2:Hg19::chr10:3207484..3207495,-#_694e90699b02ae7d6a812419c9076afap12@PITRM1
9.18e-26FFCP PHASE1:Hg19::chr10:3207484..3207495,-#_694e90699b02ae7d6a812419c9076afap12@PITRM1
9.18e-26FFCP PHASE2:Hg19::chr12:120907847..120907858,+#_694e90699b02ae7d6a812419c9076afap15@DYNLL1
9.18e-26FFCP PHASE1:Hg19::chr12:120907847..120907858,+#_694e90699b02ae7d6a812419c9076afap15@DYNLL1
9.18e-26FFCP PHASE1:Hg19::chr19:11018763..11018773,+#_694e90699b02ae7d6a812419c9076afap@chr19:11018763..11018773, +
9.18e-26FFCP PHASE2:Hg19::chr8:11325047..11325054,-#_694e90699b02ae7d6a812419c9076afap17@FAM167A
9.18e-26FFCP PHASE1:Hg19::chr7:4722287..4722294,+#_694e90699b02ae7d6a812419c9076afap9@FOXK1
9.18e-26FFCP PHASE2:Hg19::chr14:75083583..75083589,-#_694e90699b02ae7d6a812419c9076afap3@ENST00000555313
9.18e-26FFCP PHASE1:Hg19::chr14:74417096..74417108,-#_694e90699b02ae7d6a812419c9076afap5@FAM161B
9.18e-26FFCP PHASE2:Hg19::chr12:10856739..10856746,-#_694e90699b02ae7d6a812419c9076afap36@CSDA
9.18e-26FFCP PHASE1:Hg19::chr12:10856739..10856746,-#_694e90699b02ae7d6a812419c9076afap36@CSDA
9.18e-26FFCP PHASE2:Hg19::chr18:47087390..47087399,+#_694e90699b02ae7d6a812419c9076afap7@LIPG
9.18e-26FFCP PHASE1:Hg19::chr3:5059566..5059575,-#_694e90699b02ae7d6a812419c9076afap@chr3:5059566..5059575, -
9.18e-26FFCP PHASE1:Hg19::chr19:19626515..19626522,+#_694e90699b02ae7d6a812419c9076afap3@NDUFA13
9.18e-26FFCP PHASE2:Hg19::chr14:89060786..89060796,+#_694e90699b02ae7d6a812419c9076afap11@ZC3H14
9.18e-26FFCP PHASE1:Hg19::chr14:75083583..75083589,-#_694e90699b02ae7d6a812419c9076afap3@ENST00000555313
9.18e-26FFCP PHASE2:Hg19::chr9:107754023..107754028,-#_694e90699b02ae7d6a812419c9076afap5@ENST00000457720
9.18e-26FFCP PHASE2:Hg19::chr3:120188917..120188936,+#_694e90699b02ae7d6a812419c9076afap@chr3:120188917..120188936, +
9.18e-26FFCP PHASE2:Hg19::chr19:10654854..10654878,+#_694e90699b02ae7d6a812419c9076afap3@ATG4D
9.18e-26FFCP PHASE2:Hg19::chr2:220548381..220548386,+#_694e90699b02ae7d6a812419c9076afap@chr2:220548381..220548386, +