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{{UBERON
 
{{UBERON
|id=UBERON:0003101
+
|alt_id=UBERON:XAO_0003006-ZFA_0000242
|name=male organism
 
|namespace=
 
|def="Gonochoristic organism that can produce male gametes." [CARO:0000027]
 
|xref=AAO:0010033;;BILA:0000027;;CARO:0000027;;FBbt:00007004;;FMA:67811;;HAO:0000027;;TAO:0000242;;TGMA:0001838;;WBbt:0007850;;XAO:0003006;;ZFA:0000242
 
|is_a=UBERON:0000468
 
|synonym="male" RELATED [TAO:0000242];;"male human body" NARROW SENSU [FMA:67811]
 
 
|comment=
 
|comment=
|alt_id=UBERON:XAO_0003006-ZFA_0000242
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="Gonochoristic organism that can produce male gametes." [CARO:0000027]
|subset=vertebrate_core
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0003101
 +
|is_a=UBERON:0000468
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=male organism
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
+
|subset=vertebrate_core
|preceded_by=
+
|synonym="male" RELATED [TAO:0000242];;"male human body" NARROW SENSU [FMA:67811]
 +
|union_of=
 +
|xref=AAO:0010033;;BILA:0000027;;CARO:0000027;;FBbt:00007004;;FMA:67811;;HAO:0000027;;TAO:0000242;;TGMA:0001838;;WBbt:0007850;;XAO:0003006;;ZFA:0000242
 
}}
 
}}

Latest revision as of 08:37, 12 September 2014

Name:male organism
Namespace:FANTOM
Definition:"Gonochoristic organism that can produce male gametes." [CARO:0000027]
Xrefs:
links:

AAO:0010033
BILA:0000027
CARO:0000027
FBbt:00007004
FMA:67811
HAO:0000027
TAO:0000242
TGMA:0001838
WBbt:0007850
XAO:0003006

ZFA:0000242
Synonyms: "male" RELATED [TAO:0000242]
"male human body" NARROW SENSU [FMA:67811]
Alt_id: UBERON:XAO_0003006-ZFA_0000242
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000468(multi-cellular organism)



Children

disjoint from:UBERON:0003100 (female organism)
part of:UBERON:0000079 (male reproductive system),UBERON:0003135 (male reproductive organ),UBERON:0014403 (male anatomical structure)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003101 (male organism), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.88e-59FFCP PHASE1:Mm9::chr11:69431224..69431241,-#_c7da56431cfec824b79be09543844ac2p@chr11:69431224..69431241, -
1.88e-59FFCP PHASE1:Mm9::chr16:37843615..37843636,-#_c7da56431cfec824b79be09543844ac2p@chr16:37843615..37843636, -
1.88e-59FFCP PHASE1:Mm9::chr8:26314366..26314395,-#_c7da56431cfec824b79be09543844ac2p@chr8:26314366..26314395, -
1.88e-59FFCP PHASE1:Mm9::chrX:93160409..93160432,-#_c7da56431cfec824b79be09543844ac2p@chrX:93160409..93160432, -
1.88e-59FFCP PHASE2:Mm9::chr8:26314366..26314395,-#_c7da56431cfec824b79be09543844ac2p@chr8:26314366..26314395, -
1.88e-59FFCP PHASE2:Mm9::chr16:37843615..37843636,-#_c7da56431cfec824b79be09543844ac2p@chr16:37843615..37843636, -
1.88e-59FFCP PHASE2:Mm9::chr11:69431224..69431241,-#_c7da56431cfec824b79be09543844ac2p@chr11:69431224..69431241, -
1.88e-59FFCP PHASE2:Mm9::chrX:93160409..93160432,-#_c7da56431cfec824b79be09543844ac2p@chrX:93160409..93160432, -
6.54e-57FFCP PHASE2:Mm9::chr2:152430094..152430135,+#_a8c24d1f6c710c1fb9e61b1b56d8764dp1@Defb36
6.54e-57FFCP PHASE1:Mm9::chr2:152430094..152430135,+#_a8c24d1f6c710c1fb9e61b1b56d8764dp1@Defb36
1.11e-54FFCP PHASE1:Mm9::chr19:25580226..25580261,+#_c003dcb1e58be333becec34cf0cb5eadp2@Dmrt1
1.11e-54FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_c003dcb1e58be333becec34cf0cb5eadp3@Cst9
1.11e-54FFCP PHASE2:Mm9::chr19:25580226..25580261,+#_c003dcb1e58be333becec34cf0cb5eadp2@Dmrt1
1.11e-54FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_c003dcb1e58be333becec34cf0cb5eadp3@Cst9
1.11e-54FFCP PHASE2:Mm9::chr8:26314291..26314315,-#_c003dcb1e58be333becec34cf0cb5eadp@chr8:26314291..26314315, -
1.11e-54FFCP PHASE1:Mm9::chr8:26314291..26314315,-#_c003dcb1e58be333becec34cf0cb5eadp@chr8:26314291..26314315, -
4.22e-54FFCP PHASE2:Mm9::chr6:83138985..83138996,+#_bd1d7212003d4c07eff0aa4726675885p10@Dctn1
4.22e-54FFCP PHASE2:Mm9::chr11:69431091..69431096,-#_bd1d7212003d4c07eff0aa4726675885p@chr11:69431091..69431096, -
4.22e-54FFCP PHASE2:Mm9::chr11:69431571..69431587,-#_bd1d7212003d4c07eff0aa4726675885p3@Shbg
4.22e-54FFCP PHASE2:Mm9::chr19:25580353..25580364,+#_bd1d7212003d4c07eff0aa4726675885p4@Dmrt1
4.22e-54FFCP PHASE2:Mm9::chr10:127031444..127031494,-#_bd1d7212003d4c07eff0aa4726675885p@chr10:127031444..127031494, -
4.22e-54FFCP PHASE2:Mm9::chr2:31332380..31332388,+#_bd1d7212003d4c07eff0aa4726675885p@chr2:31332380..31332388, +
4.22e-54FFCP PHASE1:Mm9::chr19:25580353..25580364,+#_bd1d7212003d4c07eff0aa4726675885p4@Dmrt1
4.22e-54FFCP PHASE1:Mm9::chr2:31332380..31332388,+#_bd1d7212003d4c07eff0aa4726675885p@chr2:31332380..31332388, +
4.22e-54FFCP PHASE1:Mm9::chr10:127031444..127031494,-#_bd1d7212003d4c07eff0aa4726675885p@chr10:127031444..127031494, -
4.22e-54FFCP PHASE1:Mm9::chr11:69431091..69431096,-#_bd1d7212003d4c07eff0aa4726675885p@chr11:69431091..69431096, -
4.22e-54FFCP PHASE1:Mm9::chr11:69431571..69431587,-#_bd1d7212003d4c07eff0aa4726675885p3@Shbg
4.22e-54FFCP PHASE1:Mm9::chr6:83138985..83138996,+#_bd1d7212003d4c07eff0aa4726675885p10@Dctn1
6.24e-54FFCP PHASE1:Hg19::chr1:44584485..44584512,+#_7caa48e6b073fa7594bc17ce42341976p2@KLF17
6.24e-54FFCP PHASE2:Hg19::chr1:44584485..44584512,+#_7caa48e6b073fa7594bc17ce42341976p2@KLF17
2.5e-53FFCP PHASE2:Mm9::chr6:145564529..145564546,+#_367a377a8704d9c54da00c1a114bab11p1@Tuba3b
2.5e-53FFCP PHASE1:Mm9::chr6:145564529..145564546,+#_367a377a8704d9c54da00c1a114bab11p1@Tuba3b
2.76e-53FFCP PHASE1:Mm9::chr6:125236033..125236068,-#_0a37eca58e30889448978e8dea35b702p1@Tuba3a, p2@Tuba3b
2.76e-53FFCP PHASE2:Mm9::chr6:125236033..125236068,-#_0a37eca58e30889448978e8dea35b702p1@Tuba3a, p2@Tuba3b
1.21e-50FFCP PHASE2:Mm9::chr6:83139055..83139074,+#_477eaa80adf1ff991b986df5850ac2f7p7@Dctn1
1.21e-50FFCP PHASE2:Mm9::chr13:64190487..64190500,-#_477eaa80adf1ff991b986df5850ac2f7p3@Hsd17b3
1.21e-50FFCP PHASE1:Mm9::chr7:20074432..20074443,+#_477eaa80adf1ff991b986df5850ac2f7p2@Exoc3l2
1.21e-50FFCP PHASE2:Mm9::chr7:20074432..20074443,+#_477eaa80adf1ff991b986df5850ac2f7p2@Exoc3l2
1.21e-50FFCP PHASE1:Mm9::chr6:83139055..83139074,+#_477eaa80adf1ff991b986df5850ac2f7p7@Dctn1
1.21e-50FFCP PHASE1:Mm9::chr13:64190487..64190500,-#_477eaa80adf1ff991b986df5850ac2f7p3@Hsd17b3
1.35e-50FFCP PHASE1:Mm9::chr14:27258741..27258755,-#_d201b272fc8da128d7103ed51cf61ccep12@Slmap
1.35e-50FFCP PHASE1:Mm9::chr19:25580272..25580305,+#_d201b272fc8da128d7103ed51cf61ccep3@Dmrt1
1.35e-50FFCP PHASE2:Mm9::chrX:50788129..50788149,+#_d201b272fc8da128d7103ed51cf61ccep2@Etd
1.35e-50FFCP PHASE1:Mm9::chrX:50788129..50788149,+#_d201b272fc8da128d7103ed51cf61ccep2@Etd
1.35e-50FFCP PHASE2:Mm9::chr19:25580272..25580305,+#_d201b272fc8da128d7103ed51cf61ccep3@Dmrt1
1.35e-50FFCP PHASE2:Mm9::chr14:27258741..27258755,-#_d201b272fc8da128d7103ed51cf61ccep12@Slmap
1.68e-50FFCP PHASE1:Mm9::chr8:26314330..26314348,-#_1e5b98d7f7f7fb2755a36810fde0d567p@chr8:26314330..26314348, -
1.68e-50FFCP PHASE2:Mm9::chr8:26314330..26314348,-#_1e5b98d7f7f7fb2755a36810fde0d567p@chr8:26314330..26314348, -
1.87e-50FFCP PHASE2:Mm9::chr12:77084655..77084667,+#_a71b4a23c446f98f4b837e0f837b5845p@chr12:77084655..77084667, +
1.87e-50FFCP PHASE1:Mm9::chr12:77084655..77084667,+#_a71b4a23c446f98f4b837e0f837b5845p@chr12:77084655..77084667, +
2.09e-50FFCP PHASE2:Mm9::chrX:50788166..50788192,+#_f0f900d69f0f0ff06e70171e03f99cfep1@Etd
2.09e-50FFCP PHASE1:Mm9::chrX:50788166..50788192,+#_f0f900d69f0f0ff06e70171e03f99cfep1@Etd
3.4e-50FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_0a6038b1604d6b0fa37c17dd6a0241f5p1@Mael
3.4e-50FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_0a6038b1604d6b0fa37c17dd6a0241f5p1@Mael
2.72e-49FFCP PHASE1:Mm9::chr15:81602763..81602776,+#_c567b079d4db3fe63fee0e8c4533be21p@chr15:81602763..81602776, +
2.72e-49FFCP PHASE2:Mm9::chr15:81602763..81602776,+#_c567b079d4db3fe63fee0e8c4533be21p@chr15:81602763..81602776, +
3.05e-49FFCP PHASE2:Mm9::chr1:13216038..13216051,-#_5d191cab871f9ab3f557286fe1d059b5p@chr1:13216038..13216051, -
3.05e-49FFCP PHASE2:Mm9::chr2:152430060..152430086,+#_5d191cab871f9ab3f557286fe1d059b5p3@Defb36
3.05e-49FFCP PHASE1:Mm9::chr1:13216038..13216051,-#_5d191cab871f9ab3f557286fe1d059b5p@chr1:13216038..13216051, -
3.05e-49FFCP PHASE1:Mm9::chr2:152430060..152430086,+#_5d191cab871f9ab3f557286fe1d059b5p3@Defb36
4.33e-49FFCP PHASE1:Mm9::chr11:100940503..100940515,+#_b14f511cfb5897559c27b2b61f21b910p@chr11:100940503..100940515, +
4.33e-49FFCP PHASE2:Mm9::chr11:100940503..100940515,+#_b14f511cfb5897559c27b2b61f21b910p@chr11:100940503..100940515, +
4.33e-49FFCP PHASE1:Mm9::chrX:49154255..49154260,-#_b14f511cfb5897559c27b2b61f21b910p1@Usp26
4.33e-49FFCP PHASE2:Mm9::chrX:49154255..49154260,-#_b14f511cfb5897559c27b2b61f21b910p1@Usp26
5.47e-49FFCP PHASE2:Mm9::chr18:12758403..12758434,+#_fc62bb86f0332b3f555cce42739c5502p5@Ttc39c
5.47e-49FFCP PHASE1:Mm9::chr18:12758403..12758434,+#_fc62bb86f0332b3f555cce42739c5502p5@Ttc39c
8.92e-49FFCP PHASE1:Mm9::chr1:121420313..121420329,+#_996775b476965a41194c644855cd1b10p@chr1:121420313..121420329, +
8.92e-49FFCP PHASE1:Mm9::chr1:135261724..135261733,+#_996775b476965a41194c644855cd1b10p11@Etnk2
8.92e-49FFCP PHASE1:Mm9::chr3:89763068..89763078,-#_996775b476965a41194c644855cd1b10p@chr3:89763068..89763078, -
8.92e-49FFCP PHASE1:Mm9::chr4:140652853..140652865,+#_996775b476965a41194c644855cd1b10p@chr4:140652853..140652865, +
8.92e-49FFCP PHASE2:Mm9::chrX:71422564..71422575,+#_996775b476965a41194c644855cd1b10p2@Tktl1
8.92e-49FFCP PHASE2:Mm9::chr4:140652853..140652865,+#_996775b476965a41194c644855cd1b10p@chr4:140652853..140652865, +
8.92e-49FFCP PHASE2:Mm9::chr7:6615049..6615056,-#_996775b476965a41194c644855cd1b10p1@Zim2
8.92e-49FFCP PHASE2:Mm9::chr3:89763068..89763078,-#_996775b476965a41194c644855cd1b10p@chr3:89763068..89763078, -
8.92e-49FFCP PHASE1:Mm9::chr7:6615049..6615056,-#_996775b476965a41194c644855cd1b10p1@Zim2
8.92e-49FFCP PHASE1:Mm9::chrX:71422564..71422575,+#_996775b476965a41194c644855cd1b10p2@Tktl1
8.92e-49FFCP PHASE2:Mm9::chr1:121420313..121420329,+#_996775b476965a41194c644855cd1b10p@chr1:121420313..121420329, +
8.92e-49FFCP PHASE2:Mm9::chr1:135261724..135261733,+#_996775b476965a41194c644855cd1b10p11@Etnk2
9.66e-49FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_9048eb2a787646f0435a4343f509e34dp1@Cst12
9.66e-49FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_9048eb2a787646f0435a4343f509e34dp1@Cst12
3.5e-47FFCP PHASE1:Mm9::chr19:25580110..25580163,+#_4f01734a5c25b2e1542b6160fef60b25p1@Dmrt1
3.5e-47FFCP PHASE1:Mm9::chr1:135261737..135261767,+#_4f01734a5c25b2e1542b6160fef60b25p6@Etnk2
3.5e-47FFCP PHASE1:Mm9::chr2:148607822..148607844,+#_4f01734a5c25b2e1542b6160fef60b25p2@8030411F24Rik
3.5e-47FFCP PHASE1:Mm9::chr2:148660933..148660963,+#_4f01734a5c25b2e1542b6160fef60b25p2@Cst9
3.5e-47FFCP PHASE1:Mm9::chr15:81602721..81602750,+#_4f01734a5c25b2e1542b6160fef60b25p@chr15:81602721..81602750, +
3.5e-47FFCP PHASE2:Mm9::chr19:25580110..25580163,+#_4f01734a5c25b2e1542b6160fef60b25p1@Dmrt1
3.5e-47FFCP PHASE2:Mm9::chr2:148607822..148607844,+#_4f01734a5c25b2e1542b6160fef60b25p2@8030411F24Rik
3.5e-47FFCP PHASE2:Mm9::chr2:148660933..148660963,+#_4f01734a5c25b2e1542b6160fef60b25p2@Cst9
3.5e-47FFCP PHASE2:Mm9::chr15:81602721..81602750,+#_4f01734a5c25b2e1542b6160fef60b25p@chr15:81602721..81602750, +
3.5e-47FFCP PHASE2:Mm9::chr1:135261737..135261767,+#_4f01734a5c25b2e1542b6160fef60b25p6@Etnk2
3.88e-47FFCP PHASE2:Mm9::chr2:148607786..148607808,+#_af038feeb5e6fb7db26838dc333a612ap1@8030411F24Rik
3.88e-47FFCP PHASE1:Mm9::chr2:148607786..148607808,+#_af038feeb5e6fb7db26838dc333a612ap1@8030411F24Rik
4.29e-47FFCP PHASE1:Mm9::chr15:76701495..76701535,-#_0b623dbfd26dfa6a398f4cc8f4179b5ep3@Zfp251
4.29e-47FFCP PHASE2:Mm9::chr15:76701495..76701535,-#_0b623dbfd26dfa6a398f4cc8f4179b5ep3@Zfp251
5.26e-47FFCP PHASE2:Mm9::chr12:105339370..105339379,+#_c5bbc306621445d9f0a1e1bd709f510ep2@Serpina5
5.26e-47FFCP PHASE1:Mm9::chr12:105339370..105339379,+#_c5bbc306621445d9f0a1e1bd709f510ep2@Serpina5
6.44e-47FFCP PHASE1:Mm9::chr1:13216009..13216028,-#_b243048f9ceec6eff4148d81d0e56687p@chr1:13216009..13216028, -
6.44e-47FFCP PHASE2:Mm9::chr1:13216009..13216028,-#_b243048f9ceec6eff4148d81d0e56687p@chr1:13216009..13216028, -
7.89e-47FFCP PHASE2:Mm9::chr17:49649179..49649202,-#_ae3eee0b933d3b5de53dd11371a948bfp@chr17:49649179..49649202, -
7.89e-47FFCP PHASE1:Mm9::chr17:49649179..49649202,-#_ae3eee0b933d3b5de53dd11371a948bfp@chr17:49649179..49649202, -