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{{UBERON
 
{{UBERON
|id=UBERON:0003513
+
|alt_id=
|name=trunk blood vessel
 
|namespace=
 
|def="A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
 
|xref=MA:0000511
 
|is_a=UBERON:0001981
 
|synonym="blood vessel of torso" EXACT [OBOL:automatic];;"blood vessel of trunk" EXACT [OBOL:automatic];;"torso blood vessel" EXACT [OBOL:automatic]
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0003513
 +
|is_a=UBERON:0001981
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=trunk blood vessel
 +
|namespace=
 +
|obo_creation_date=
 
|part_of=UBERON:0002100
 
|part_of=UBERON:0002100
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym="blood vessel of torso" EXACT [OBOL:automatic];;"blood vessel of trunk" EXACT [OBOL:automatic];;"torso blood vessel" EXACT [OBOL:automatic]
 +
|union_of=
 +
|xref=MA:0000511
 
}}
 
}}

Revision as of 02:24, 12 September 2014

Name:trunk blood vessel
Definition:"A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000511
Synonyms: "blood vessel of torso" EXACT [OBOL:automatic]
"blood vessel of trunk" EXACT [OBOL:automatic]
"torso blood vessel" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0002100(trunk)



Children

is a:UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)

... further results Mouse (Mus musculus)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_4496c44f15d11b0db3cb2e6f67e2a000p6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:82193340..82193343, +