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{{UBERON
 
{{UBERON
|id=UBERON:0004647
+
|alt_id=
|name=liver lobule
 
|namespace=
 
|def=
 
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
 
|is_a=UBERON:0000064;;UBERON:0000077
 
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def=
|subset=
 
|adjacent_to=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0004647
 +
|is_a=UBERON:0000064 ;;UBERON:0004119
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=liver lobule
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=UBERON:0001280
 
|part_of=UBERON:0001280
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
 +
|union_of=
 +
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
 
}}
 
}}

Latest revision as of 08:46, 12 September 2014

Name:liver lobule
Namespace:FANTOM
Xrefs:
links:

FMA:14471
MA:0002494
ncithesaurus:Hepatic_Lobule

SCTID:362194004
Synonyms: "hepatic lobule" EXACT [FMA:14471]
"lobulus hepaticus" EXACT [FMA:14471]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001280(liver parenchyma)



Children

part of:UBERON:0001172 (hepatic acinus),UBERON:0001281 (hepatic sinusoid),UBERON:0001282 (intralobular bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004647 (liver lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.74e-88FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
9.74e-88FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_d467f18b3a526e740a80ed85ff1ec551p6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_d467f18b3a526e740a80ed85ff1ec551p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_d467f18b3a526e740a80ed85ff1ec551p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_d467f18b3a526e740a80ed85ff1ec551p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_d467f18b3a526e740a80ed85ff1ec551p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_d467f18b3a526e740a80ed85ff1ec551p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_d467f18b3a526e740a80ed85ff1ec551p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_d467f18b3a526e740a80ed85ff1ec551p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_d467f18b3a526e740a80ed85ff1ec551p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_d467f18b3a526e740a80ed85ff1ec551p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_d467f18b3a526e740a80ed85ff1ec551p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_d467f18b3a526e740a80ed85ff1ec551p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223756..109223764, -