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{{UBERON
{{UBERON
|id=UBERON:0004647
|alt_id=
|name=liver lobule
|namespace=
|def=
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
|is_a=UBERON:0000064;;UBERON:0004119
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004647
|is_a=UBERON:0000064 ;;UBERON:0004119
|is_obsolete=
|located_in=
|located_in=
|name=liver lobule
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001280
|part_of=UBERON:0001280
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471]
|union_of=
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:liver lobule
Namespace:FANTOM
Xrefs:
links:

FMA:14471
MA:0002494
ncithesaurus:Hepatic_Lobule

SCTID:362194004
Synonyms: "hepatic lobule" EXACT [FMA:14471]
"lobulus hepaticus" EXACT [FMA:14471]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001280(liver parenchyma)



Children

part of:UBERON:0001172 (hepatic acinus),UBERON:0001281 (hepatic sinusoid),UBERON:0001282 (intralobular bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004647 (liver lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.74e-88FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
9.74e-88FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463p2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_d467f18b3a526e740a80ed85ff1ec551p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_d467f18b3a526e740a80ed85ff1ec551p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_d467f18b3a526e740a80ed85ff1ec551p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_d467f18b3a526e740a80ed85ff1ec551p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_d467f18b3a526e740a80ed85ff1ec551p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_d467f18b3a526e740a80ed85ff1ec551p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_d467f18b3a526e740a80ed85ff1ec551p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_d467f18b3a526e740a80ed85ff1ec551p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_d467f18b3a526e740a80ed85ff1ec551p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_d467f18b3a526e740a80ed85ff1ec551p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_d467f18b3a526e740a80ed85ff1ec551p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_d467f18b3a526e740a80ed85ff1ec551p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_d467f18b3a526e740a80ed85ff1ec551p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_d467f18b3a526e740a80ed85ff1ec551p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:43407825..43407830, +
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_d467f18b3a526e740a80ed85ff1ec551p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_d467f18b3a526e740a80ed85ff1ec551p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_d467f18b3a526e740a80ed85ff1ec551p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_d467f18b3a526e740a80ed85ff1ec551p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_d467f18b3a526e740a80ed85ff1ec551p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_d467f18b3a526e740a80ed85ff1ec551p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_d467f18b3a526e740a80ed85ff1ec551p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_d467f18b3a526e740a80ed85ff1ec551p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_d467f18b3a526e740a80ed85ff1ec551p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_d467f18b3a526e740a80ed85ff1ec551p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_d467f18b3a526e740a80ed85ff1ec551p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_d467f18b3a526e740a80ed85ff1ec551p@chr10:85585949..85585969, -

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