Personal tools

UBERON:0004820

From FANTOM5_SSTAR

Revision as of 04:37, 27 June 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:bile duct epithelium
Definition:"Epithelium of the gallbladder and the intrahepatic and extrahepatic bile ducts." [BTO:0001513]
Xrefs:
links:

BTO:0000417
BTO:0001513
MA:0001629

ncithesaurus:Bile_Duct_Epithelium
Synonyms: "bile duct epithelial tissue" EXACT [OBOL:automatic]
"biliary duct epithelial tissue" EXACT [OBOL:automatic]
"biliary duct epithelium" EXACT [OBOL:automatic]
"biliary epithelium" EXACT [BTO:0001513]
"epithelial tissue of bile duct" EXACT [OBOL:automatic]
"epithelial tissue of biliary duct" EXACT [OBOL:automatic]
"epithelium of bile duct" EXACT [OBOL:automatic]
"epithelium of biliary duct" EXACT [OBOL:automatic]
Comments:todo - check if BTO terms need merged

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005911(endo-epithelium)
part_of:UBERON:0002394(bile duct)



Children

is a:UBERON:0004823 (intrahepatic bile duct epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004820 (bile duct epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results