UBERON:0004875: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0004875
|name=nephrogenic cord
|namespace=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:N...") |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=part_of or develops_from urogenital ridge? | |comment=part_of or develops_from urogenital ridge? | ||
|created_by= | |created_by= | ||
| | |def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0004876 | |develops_from=UBERON:0004876 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004875 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=nephrogenic cord | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000922 | |part_of=UBERON:0000922 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | |||
|union_of= | |||
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | |||
}} | }} | ||
Latest revision as of 17:49, 12 September 2014
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0004876(urogenital ridge) |
| part_of: | UBERON:0000922(embryo) |
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:23308115..23308126, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_2c808356ccd804cd36d69a04f78b05be | p@chr14:67453354..67453365, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101959282..101959299, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_2c808356ccd804cd36d69a04f78b05be | p4@Ido1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_2c808356ccd804cd36d69a04f78b05be | p2@Gm6792 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:151927980..151927988, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:120078716..120078763,-#_2c808356ccd804cd36d69a04f78b05be | p@chr5:120078716..120078763, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:158083973..158083982,+#_2c808356ccd804cd36d69a04f78b05be | p3@Bpi |
| 4.54e-44 | FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_2c808356ccd804cd36d69a04f78b05be | p@chr3:103650730..103650741, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:43367743..43367754, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:75304916..75304925,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75304916..75304925, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:56469136..56469145, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379972..31379981, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:25677632..25677636, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19142604..19142612, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:75559819..75559830, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_2c808356ccd804cd36d69a04f78b05be | p@chr3:65253465..65253475, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_2c808356ccd804cd36d69a04f78b05be | p@chr18:62775330..62775347, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:148625223..148625234, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_2c808356ccd804cd36d69a04f78b05be | p3@Wdr25 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:43367743..43367754, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_2c808356ccd804cd36d69a04f78b05be | p@chr6:118298429..118298448, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:72756032..72756041, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:105798218..105798228,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:105798218..105798228, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:110773795..110773801, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798114..75798125,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:75798114..75798125, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_2c808356ccd804cd36d69a04f78b05be | p@chr18:74784728..74784738, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:147624258..147624285, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_2c808356ccd804cd36d69a04f78b05be | p5@Med24 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_2c808356ccd804cd36d69a04f78b05be | p3@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141429..19141440, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379377..31379384, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_2c808356ccd804cd36d69a04f78b05be | p2@Rnase13 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379261..21379264, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597725..89597743, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378774..21378782, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379437..31379448, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:24670830..24670845, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:10488683..10488691, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:20422498..20422506,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20422498..20422506, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_2c808356ccd804cd36d69a04f78b05be | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_2c808356ccd804cd36d69a04f78b05be | p@chr7:65995799..65995810, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164479326..164479336,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:164479326..164479336, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:52712744..52712754, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:75798114..75798125, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155698178..155698191, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_2c808356ccd804cd36d69a04f78b05be | p1@Defb44-ps |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:96150839..96150842, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20219008..20219045, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_2c808356ccd804cd36d69a04f78b05be | p3@Glb1l2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:25565920..25565950,-#_2c808356ccd804cd36d69a04f78b05be | p@chr7:25565920..25565950, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:35930667..35930691, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379065..21379072, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:160347529..160347538, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_2c808356ccd804cd36d69a04f78b05be | p@chr17:35249011..35249020, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_2c808356ccd804cd36d69a04f78b05be | p11@P4ha2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:160347529..160347538, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_2c808356ccd804cd36d69a04f78b05be | p4@Ido1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155722..90155743, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:63779573..63779582, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_2c808356ccd804cd36d69a04f78b05be | p@chr10:91753336..91753348, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379125..21379144, - |
