Personal tools

UBERON:0004903

From FANTOM5_SSTAR

Revision as of 08:49, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:bronchoalveolar duct junction
Namespace:FANTOM
Definition:"A branch point connecting the respiratory bronchioles to the alveolar ducts[MP]." [MP:0004390]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0007651(anatomical junction)
part_of:UBERON:0001004(respiratory system)



Children

derives from:FF:0102060 (bronchioalveolar carcinoma cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
  • 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
  • 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004903 (bronchoalveolar duct junction), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_de0c31e6287256b7af47c537bfb16808p@chr17:13574618..13574636, -
1.55e-98FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_de0c31e6287256b7af47c537bfb16808p13@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_de0c31e6287256b7af47c537bfb16808p1@ENST00000418699, p1@ENST00000432330
1.55e-98FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_de0c31e6287256b7af47c537bfb16808p@chr3:87647430..87647437, -
1.55e-98FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_de0c31e6287256b7af47c537bfb16808p1@SSX5
1.55e-98FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_de0c31e6287256b7af47c537bfb16808p1@ENST00000430271
1.55e-98FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_de0c31e6287256b7af47c537bfb16808p16@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_de0c31e6287256b7af47c537bfb16808p14@DNMBP
1.55e-98FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_de0c31e6287256b7af47c537bfb16808p@chr17:63511856..63511858, -
1.55e-98FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_de0c31e6287256b7af47c537bfb16808p12@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_de0c31e6287256b7af47c537bfb16808p14@DNMBP
1.55e-98FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_de0c31e6287256b7af47c537bfb16808p@chr3:87647430..87647437, -
1.55e-98FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_de0c31e6287256b7af47c537bfb16808p@chr17:63511856..63511858, -
1.55e-98FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_de0c31e6287256b7af47c537bfb16808p13@DNMBP
1.55e-98FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_de0c31e6287256b7af47c537bfb16808p1@ENST00000430271
1.55e-98FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_de0c31e6287256b7af47c537bfb16808p16@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_de0c31e6287256b7af47c537bfb16808p13@DNMBP
1.55e-98FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_de0c31e6287256b7af47c537bfb16808p@chr14:36536932..36536937, -
1.55e-98FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_de0c31e6287256b7af47c537bfb16808p@chr14:36536932..36536937, -
1.55e-98FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_de0c31e6287256b7af47c537bfb16808p12@CLEC16A
1.55e-98FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_de0c31e6287256b7af47c537bfb16808p9@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_de0c31e6287256b7af47c537bfb16808p12@CLEC16A
1.55e-98FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_de0c31e6287256b7af47c537bfb16808p1@ENST00000418699, p1@ENST00000432330
1.55e-98FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_de0c31e6287256b7af47c537bfb16808p13@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_de0c31e6287256b7af47c537bfb16808p@chr17:13574618..13574636, -
1.55e-98FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_de0c31e6287256b7af47c537bfb16808p9@CPXM1
1.55e-98FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_de0c31e6287256b7af47c537bfb16808p1@SSX5
1.55e-98FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_de0c31e6287256b7af47c537bfb16808p12@CPXM1
3.96e-66FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_091abe149a866b4fd4338315cdc34198p@chr2:191696381..191696384, -
3.96e-66FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_091abe149a866b4fd4338315cdc34198p@chr2:191696381..191696384, -
2.74e-50FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_3cc260479db17d99f8c9131cebab361bp30@PDP1
2.74e-50FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_3cc260479db17d99f8c9131cebab361bp@chr9:103785643..103785646, -
2.74e-50FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_3cc260479db17d99f8c9131cebab361bp11@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_3cc260479db17d99f8c9131cebab361bp30@NELF
2.74e-50FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_3cc260479db17d99f8c9131cebab361bp11@DNMBP
2.74e-50FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_3cc260479db17d99f8c9131cebab361bp3@FMR1NB
2.74e-50FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_3cc260479db17d99f8c9131cebab361bp30@PDP1
2.74e-50FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_3cc260479db17d99f8c9131cebab361bp@chr8:122157279..122157284, -
2.74e-50FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_3cc260479db17d99f8c9131cebab361bp3@FMR1NB
2.74e-50FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_3cc260479db17d99f8c9131cebab361bp30@NELF
2.74e-50FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_3cc260479db17d99f8c9131cebab361bp@chr11:104005546..104005596, -
2.74e-50FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_3cc260479db17d99f8c9131cebab361bp@chr11:104005546..104005596, -
2.74e-50FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_3cc260479db17d99f8c9131cebab361bp@chr4:169956294..169956301, -
2.74e-50FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_3cc260479db17d99f8c9131cebab361bp@chr8:122157279..122157284, -
2.74e-50FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_3cc260479db17d99f8c9131cebab361bp7@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_3cc260479db17d99f8c9131cebab361bp@chr11:106266838..106266843, +
2.74e-50FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_3cc260479db17d99f8c9131cebab361bp@chr11:106266838..106266843, +
2.74e-50FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_3cc260479db17d99f8c9131cebab361bp7@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_3cc260479db17d99f8c9131cebab361bp@chr11:41809203..41809208, -
2.74e-50FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_3cc260479db17d99f8c9131cebab361bp@chr9:103785643..103785646, -
2.74e-50FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_3cc260479db17d99f8c9131cebab361bp@chr11:41809203..41809208, -
2.74e-50FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_3cc260479db17d99f8c9131cebab361bp@chr4:169956294..169956301, -
4.52e-50FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_5fff58824bb56b0367f720c26a22c6abp@chr6:46985426..46985427, -
4.52e-50FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_5fff58824bb56b0367f720c26a22c6abp@chr3:139035972..139036016, -
4.52e-50FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_5fff58824bb56b0367f720c26a22c6abp@chr6:169691363..169691375, -
4.52e-50FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_5fff58824bb56b0367f720c26a22c6abp@chr12:65386452..65386492, -
4.52e-50FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_5fff58824bb56b0367f720c26a22c6abp@chr12:65386452..65386492, -
4.52e-50FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399533..45399540, +
4.52e-50FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_5fff58824bb56b0367f720c26a22c6abp6@INSIG2
4.52e-50FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_5fff58824bb56b0367f720c26a22c6abp34@NELF
4.52e-50FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399263..45399274, +
4.52e-50FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_5fff58824bb56b0367f720c26a22c6abp12@AADAT
4.52e-50FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_5fff58824bb56b0367f720c26a22c6abp36@NELF
4.52e-50FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399245..45399258, +
4.52e-50FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_5fff58824bb56b0367f720c26a22c6abp@chr1:93054640..93054674, -
4.52e-50FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_5fff58824bb56b0367f720c26a22c6abp@chr6:46985426..46985427, -
4.52e-50FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399294..45399301, +
4.52e-50FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_5fff58824bb56b0367f720c26a22c6abp@chr1:119837700..119837705, +
4.52e-50FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_5fff58824bb56b0367f720c26a22c6abp6@INSIG2
4.52e-50FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_5fff58824bb56b0367f720c26a22c6abp34@NELF
4.52e-50FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399263..45399274, +
4.52e-50FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_5fff58824bb56b0367f720c26a22c6abp@chr17:63533845..63533851, -
4.52e-50FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45405332..45405343, +
4.52e-50FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_5fff58824bb56b0367f720c26a22c6abp@chr1:93054640..93054674, -
4.52e-50FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:141743015..141743025, +
4.52e-50FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_5fff58824bb56b0367f720c26a22c6abp5@C20orf141
4.52e-50FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_5fff58824bb56b0367f720c26a22c6abp@chr17:63533845..63533851, -
4.52e-50FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399294..45399301, +
4.52e-50FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45405393..45405412, +
4.52e-50FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_5fff58824bb56b0367f720c26a22c6abp@chr6:169691363..169691375, -
4.52e-50FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_5fff58824bb56b0367f720c26a22c6abp@chr1:119837700..119837705, +
4.52e-50FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_5fff58824bb56b0367f720c26a22c6abp@chr3:139035972..139036016, -
4.52e-50FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45405332..45405343, +
4.52e-50FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399533..45399540, +
4.52e-50FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_5fff58824bb56b0367f720c26a22c6abp@chr15:55806847..55806854, -
4.52e-50FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_5fff58824bb56b0367f720c26a22c6abp@chr15:55806847..55806854, -
4.52e-50FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_5fff58824bb56b0367f720c26a22c6abp36@NELF
4.52e-50FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_5fff58824bb56b0367f720c26a22c6abp12@AADAT
4.52e-50FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_5fff58824bb56b0367f720c26a22c6abp5@C20orf141
4.52e-50FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45399245..45399258, +
4.52e-50FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:141743015..141743025, +
4.52e-50FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_5fff58824bb56b0367f720c26a22c6abp@chr6:45405393..45405412, +
4.0e-45FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_9967f2fb975371f61e7b2d92147b3628p1@BC018659
4.0e-45FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_9967f2fb975371f61e7b2d92147b3628p1@BC018659
1.1e-40FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_0b13377f1a336aadf76f4723fe2b3cb1p@chr14:29047235..29047244, +
1.1e-40FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_0b13377f1a336aadf76f4723fe2b3cb1p@chr14:29047235..29047244, +
3.61e-34FFCP PHASE2:Hg19::chr8:144260966..144260967,-#_a3d8fc9ddcd4ec438c1df993bd8414d0p@chr8:144260966..144260967, -
3.61e-34FFCP PHASE2:Hg19::chr11:47256459..47256470,+#_a3d8fc9ddcd4ec438c1df993bd8414d0p@chr11:47256459..47256470, +
3.61e-34FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_a3d8fc9ddcd4ec438c1df993bd8414d0p@chr6:73786620..73786627, +
3.61e-34FFCP PHASE1:Hg19::chr11:47256459..47256470,+#_a3d8fc9ddcd4ec438c1df993bd8414d0p@chr11:47256459..47256470, +