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UBERON:0005311

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Name:mammary placode
Namespace:FANTOM
Definition:"The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper[GO]." [GO:0060596]
Comments:TODO develops_from

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0011814(non-neurogenic ectodermal placode)
develops_from:UBERON:0008425(mammary ridge)



Children

develops from:UBERON:0005333 (mammary bud)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005311 (mammary placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.72e-89FFCP PHASE1:Hg19::chr12:122439564..122439597,+#_68eadd04ad6c9526d6e8de375b98bfb1p4@WDR66
5.72e-89FFCP PHASE2:Hg19::chr12:122439564..122439597,+#_68eadd04ad6c9526d6e8de375b98bfb1p4@WDR66
2.57e-88FFCP PHASE1:Hg19::chr19:15160255..15160260,+#_2a4f481679d65f48b816b3eea23a99f1p4@CASP14
2.57e-88FFCP PHASE2:Hg19::chr19:15160255..15160260,+#_2a4f481679d65f48b816b3eea23a99f1p4@CASP14
1.87e-86FFCP PHASE1:Mm9::chr5:88214300..88214314,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88214300..88214314, +
1.87e-86FFCP PHASE1:Mm9::chr5:88106613..88106646,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88106613..88106646, +
1.87e-86FFCP PHASE1:Mm9::chr2:99574978..99574987,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr2:99574978..99574987, +
1.87e-86FFCP PHASE1:Mm9::chr15:103393839..103393860,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393839..103393860, -
1.87e-86FFCP PHASE2:Mm9::chr5:88206460..88206469,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88206460..88206469, +
1.87e-86FFCP PHASE1:Mm9::chr5:88358910..88358931,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358910..88358931, +
1.87e-86FFCP PHASE1:Mm9::chr5:88123730..88123744,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123730..88123744, +
1.87e-86FFCP PHASE1:Mm9::chr11:109658667..109658675,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:109658667..109658675, -
1.87e-86FFCP PHASE2:Mm9::chr11:109658712..109658715,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:109658712..109658715, -
1.87e-86FFCP PHASE2:Mm9::chr15:103393393..103393402,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393393..103393402, +
1.87e-86FFCP PHASE2:Mm9::chr5:88104060..88104087,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88104060..88104087, -
1.87e-86FFCP PHASE1:Mm9::chr4:115520060..115520062,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:115520060..115520062, -
1.87e-86FFCP PHASE2:Mm9::chr2:93360875..93360880,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr2:93360875..93360880, -
1.87e-86FFCP PHASE2:Mm9::chr1:139647999..139648007,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr1:139647999..139648007, -
1.87e-86FFCP PHASE2:Mm9::chr5:88217757..88217772,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88217757..88217772, +
1.87e-86FFCP PHASE1:Mm9::chr6:24162312..24162345,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:24162312..24162345, -
1.87e-86FFCP PHASE1:Mm9::chr4:118636797..118636805,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118636797..118636805, +
1.87e-86FFCP PHASE2:Mm9::chr11:6537234..6537253,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:6537234..6537253, +
1.87e-86FFCP PHASE2:Mm9::chr5:88123692..88123697,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123692..88123697, -
1.87e-86FFCP PHASE2:Mm9::chr5:88358988..88358999,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358988..88358999, -
1.87e-86FFCP PHASE2:Mm9::chr8:98629001..98629006,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr8:98629001..98629006, +
1.87e-86FFCP PHASE1:Mm9::chr8:69495848..69495849,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr8:69495848..69495849, -
1.87e-86FFCP PHASE1:Mm9::chr15:103393382..103393391,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393382..103393391, -
1.87e-86FFCP PHASE2:Mm9::chr18:53658339..53658343,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:53658339..53658343, -
1.87e-86FFCP PHASE1:Mm9::chr5:88358781..88358799,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358781..88358799, +
1.87e-86FFCP PHASE1:Mm9::chr5:88123611..88123628,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123611..88123628, -
1.87e-86FFCP PHASE2:Mm9::chr15:103393256..103393264,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393256..103393264, -
1.87e-86FFCP PHASE2:Mm9::chr5:88100023..88100041,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88100023..88100041, +
1.87e-86FFCP PHASE2:Mm9::chr5:88215650..88215658,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88215650..88215658, -
1.87e-86FFCP PHASE1:Mm9::chr13:90032838..90032840,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr13:90032838..90032840, -
1.87e-86FFCP PHASE1:Mm9::chr11:6535571..6535575,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:6535571..6535575, -
1.87e-86FFCP PHASE2:Mm9::chr5:88123593..88123599,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123593..88123599, -
1.87e-86FFCP PHASE1:Mm9::chr5:88210806..88210830,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88210806..88210830, +
1.87e-86FFCP PHASE1:Mm9::chr5:88100568..88100584,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88100568..88100584, -
1.87e-86FFCP PHASE1:Mm9::chr1:37943205..37943209,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr1:37943205..37943209, +
1.87e-86FFCP PHASE1:Mm9::chr18:79024191..79024193,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:79024191..79024193, +
1.87e-86FFCP PHASE2:Mm9::chr13:111655159..111655168,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr13:111655159..111655168, +
1.87e-86FFCP PHASE2:Mm9::chr4:118636782..118636786,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118636782..118636786, +
1.87e-86FFCP PHASE2:Mm9::chr7:112544745..112544756,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr7:112544745..112544756, -
1.87e-86FFCP PHASE1:Mm9::chr5:88217783..88217793,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88217783..88217793, +
1.87e-86FFCP PHASE1:Mm9::chr5:88121815..88121823,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88121815..88121823, -
1.87e-86FFCP PHASE2:Mm9::chr6:137412973..137412974,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:137412973..137412974, +
1.87e-86FFCP PHASE2:Mm9::chr5:88095990..88096001,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88095990..88096001, +
1.87e-86FFCP PHASE2:Mm9::chr9:77686674..77686686,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr9:77686674..77686686, +
1.87e-86FFCP PHASE2:Mm9::chr5:88210863..88210879,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88210863..88210879, -
1.87e-86FFCP PHASE1:Mm9::chr5:88126164..88126171,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88126164..88126171, -
1.87e-86FFCP PHASE1:Mm9::chr11:29447361..29447364,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:29447361..29447364, -
1.87e-86FFCP PHASE2:Mm9::chr12:53708625..53708630,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr12:53708625..53708630, +
1.87e-86FFCP PHASE2:Mm9::chr5:88121676..88121704,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88121676..88121704, -
1.87e-86FFCP PHASE1:Mm9::chr5:88207077..88207084,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88207077..88207084, +
1.87e-86FFCP PHASE1:Mm9::chr5:88096268..88096283,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88096268..88096283, +
1.87e-86FFCP PHASE1:Mm9::chr18:6595472..6595477,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:6595472..6595477, -
1.87e-86FFCP PHASE2:Mm9::chr11:29447361..29447364,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:29447361..29447364, -
1.87e-86FFCP PHASE2:Mm9::chr5:88358854..88358874,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358854..88358874, +
1.87e-86FFCP PHASE2:Mm9::chr19:56109584..56109587,+#_30b6d7c8bf53f346980477d3b2cc2429p1@uc008hyp.1
1.87e-86FFCP PHASE2:Mm9::chr4:118627429..118627443,-#_30b6d7c8bf53f346980477d3b2cc2429p1@ENSMUST00000155069, p1@uc008ulc.1
1.87e-86FFCP PHASE2:Mm9::chr7:109210996..109211006,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr7:109210996..109211006, -
1.87e-86FFCP PHASE1:Mm9::chr5:88215663..88215674,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88215663..88215674, +
1.87e-86FFCP PHASE1:Mm9::chr5:88109040..88109079,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88109040..88109079, +
1.87e-86FFCP PHASE2:Mm9::chrX:158813399..158813404,-#_30b6d7c8bf53f346980477d3b2cc2429p@chrX:158813399..158813404, -
1.87e-86FFCP PHASE2:Mm9::chr4:118637931..118637942,+#_30b6d7c8bf53f346980477d3b2cc2429p7@Lao1
1.87e-86FFCP PHASE2:Mm9::chr5:88209047..88209050,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88209047..88209050, -
1.87e-86FFCP PHASE1:Mm9::chr5:88359009..88359014,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88359009..88359014, -
1.87e-86FFCP PHASE2:Mm9::chr15:103393764..103393775,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393764..103393775, -
1.87e-86FFCP PHASE2:Mm9::chr5:88107092..88107108,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88107092..88107108, -
1.87e-86FFCP PHASE1:Mm9::chr5:53394250..53394255,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:53394250..53394255, +
1.87e-86FFCP PHASE1:Mm9::chr4:118634204..118634217,+#_30b6d7c8bf53f346980477d3b2cc2429p3@Lao1
1.87e-86FFCP PHASE1:Mm9::chr18:27904115..27904120,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:27904115..27904120, +
1.87e-86FFCP PHASE1:Mm9::chr4:118640598..118640603,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118640598..118640603, -
1.87e-86FFCP PHASE2:Mm9::chr5:88123745..88123777,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123745..88123777, +
1.87e-86FFCP PHASE2:Mm9::chr3:25229830..25229833,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr3:25229830..25229833, +
1.87e-86FFCP PHASE2:Mm9::chr5:88361470..88361479,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88361470..88361479, +
1.87e-86FFCP PHASE2:Mm9::chr10:46245998..46245999,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr10:46245998..46245999, +
1.87e-86FFCP PHASE1:Mm9::chr15:103393725..103393729,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393725..103393729, -
1.87e-86FFCP PHASE2:Mm9::chr5:88204809..88204827,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88204809..88204827, +
1.87e-86FFCP PHASE1:Mm9::chr5:88123692..88123697,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123692..88123697, -
1.87e-86FFCP PHASE1:Mm9::chr12:8768872..8768876,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr12:8768872..8768876, -
1.87e-86FFCP PHASE2:Mm9::chr15:103393352..103393360,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393352..103393360, -
1.87e-86FFCP PHASE2:Mm9::chr5:88103101..88103120,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88103101..88103120, -
1.87e-86FFCP PHASE1:Mm9::chr3:94221876..94221878,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr3:94221876..94221878, -
1.87e-86FFCP PHASE1:Mm9::chr15:85620623..85620633,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:85620623..85620633, -
1.87e-86FFCP PHASE2:Mm9::chr5:88217569..88217586,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88217569..88217586, +
1.87e-86FFCP PHASE1:Mm9::chr4:118634547..118634566,+#_30b6d7c8bf53f346980477d3b2cc2429p2@Lao1
1.87e-86FFCP PHASE1:Mm9::chr2:164568599..164568608,-#_30b6d7c8bf53f346980477d3b2cc2429p8@Wfdc3
1.87e-86FFCP PHASE1:Mm9::chr14:32247461..32247472,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr14:32247461..32247472, -
1.87e-86FFCP PHASE1:Mm9::chr11:6537248..6537263,-#_30b6d7c8bf53f346980477d3b2cc2429p3@Wap
1.87e-86FFCP PHASE2:Mm9::chr11:6535571..6535575,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:6535571..6535575, -
1.87e-86FFCP PHASE2:Mm9::chr9:68417059..68417064,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr9:68417059..68417064, -
1.87e-86FFCP PHASE2:Mm9::chr5:88123612..88123619,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123612..88123619, +
1.87e-86FFCP PHASE1:Mm9::chr5:88210886..88210920,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88210886..88210920, -
1.87e-86FFCP PHASE1:Mm9::chr5:88103244..88103281,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88103244..88103281, -
1.87e-86FFCP PHASE1:Mm9::chr1:40637138..40637147,+#_30b6d7c8bf53f346980477d3b2cc2429p10@Slc9a4
1.87e-86FFCP PHASE1:Mm9::chr15:103393267..103393277,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393267..103393277, -
1.87e-86FFCP PHASE2:Mm9::chr5:88126190..88126195,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88126190..88126195, -
1.87e-86FFCP PHASE1:Mm9::chr5:88356056..88356074,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88356056..88356074, +
1.87e-86FFCP PHASE1:Mm9::chr5:88123555..88123565,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123555..88123565, -

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