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{{UBERON
{{UBERON
|id=UBERON:0005913
|alt_id=
|name=zone of bone organ
|namespace=
|def=
|xref=FMA:10483
|is_a=UBERON:0000064;;UBERON:0004765
|synonym="bone organ zone" EXACT [FMA:10483]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005913
|is_a=UBERON:0000064
|is_obsolete=
|located_in=
|located_in=
|name=zone of bone organ
|namespace=
|obo_creation_date=
|part_of=UBERON:0001474
|part_of=UBERON:0001474
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="bone organ zone" EXACT [FMA:10483]
|union_of=
|xref=FMA:10483
}}
}}

Revision as of 11:38, 12 September 2014

Name:zone of bone organ
Xrefs:
links:
FMA:10483
Synonyms: "bone organ zone" EXACT [FMA:10483]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part)
part_of:UBERON:0001474(bone element)



Children

is a:UBERON:0001694 (petrous part of temporal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005913 (zone of bone organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_7b6f029a0160898c16bcaba809565328p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_7b6f029a0160898c16bcaba809565328p2@Strc
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_7b6f029a0160898c16bcaba809565328p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_7b6f029a0160898c16bcaba809565328p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_7b6f029a0160898c16bcaba809565328p1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_7b6f029a0160898c16bcaba809565328p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_7b6f029a0160898c16bcaba809565328p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_7b6f029a0160898c16bcaba809565328p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_7b6f029a0160898c16bcaba809565328p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_7b6f029a0160898c16bcaba809565328p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_7b6f029a0160898c16bcaba809565328p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_7b6f029a0160898c16bcaba809565328p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_7b6f029a0160898c16bcaba809565328p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_7b6f029a0160898c16bcaba809565328p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_7b6f029a0160898c16bcaba809565328p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_7b6f029a0160898c16bcaba809565328p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_7b6f029a0160898c16bcaba809565328p2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_7b6f029a0160898c16bcaba809565328p4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_7b6f029a0160898c16bcaba809565328p2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_7b6f029a0160898c16bcaba809565328p1@Tecta
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_7b6f029a0160898c16bcaba809565328p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_7b6f029a0160898c16bcaba809565328p4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_7b6f029a0160898c16bcaba809565328p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_7b6f029a0160898c16bcaba809565328p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_7b6f029a0160898c16bcaba809565328p5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_7b6f029a0160898c16bcaba809565328p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_7b6f029a0160898c16bcaba809565328p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_7b6f029a0160898c16bcaba809565328p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_7b6f029a0160898c16bcaba809565328p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_7b6f029a0160898c16bcaba809565328p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_7b6f029a0160898c16bcaba809565328p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_7b6f029a0160898c16bcaba809565328p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_7b6f029a0160898c16bcaba809565328p11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_7b6f029a0160898c16bcaba809565328p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_7b6f029a0160898c16bcaba809565328p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_7b6f029a0160898c16bcaba809565328p@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_7b6f029a0160898c16bcaba809565328p2@Otof
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_7b6f029a0160898c16bcaba809565328p1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_7b6f029a0160898c16bcaba809565328p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_7b6f029a0160898c16bcaba809565328p3@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_7b6f029a0160898c16bcaba809565328p5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_7b6f029a0160898c16bcaba809565328p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_7b6f029a0160898c16bcaba809565328p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_7b6f029a0160898c16bcaba809565328p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_7b6f029a0160898c16bcaba809565328p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_7b6f029a0160898c16bcaba809565328p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_7b6f029a0160898c16bcaba809565328p1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_7b6f029a0160898c16bcaba809565328p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_7b6f029a0160898c16bcaba809565328p1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_7b6f029a0160898c16bcaba809565328p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_7b6f029a0160898c16bcaba809565328p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_7b6f029a0160898c16bcaba809565328p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_7b6f029a0160898c16bcaba809565328p21@Espn
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_7b6f029a0160898c16bcaba809565328p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_7b6f029a0160898c16bcaba809565328p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_7b6f029a0160898c16bcaba809565328p1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_7b6f029a0160898c16bcaba809565328p4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_7b6f029a0160898c16bcaba809565328p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_7b6f029a0160898c16bcaba809565328p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_7b6f029a0160898c16bcaba809565328p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_7b6f029a0160898c16bcaba809565328p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_7b6f029a0160898c16bcaba809565328p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_7b6f029a0160898c16bcaba809565328p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_7b6f029a0160898c16bcaba809565328p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_7b6f029a0160898c16bcaba809565328p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_7b6f029a0160898c16bcaba809565328p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_7b6f029a0160898c16bcaba809565328p1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_7b6f029a0160898c16bcaba809565328p7@A730017C20Rik
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_7b6f029a0160898c16bcaba809565328p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_7b6f029a0160898c16bcaba809565328p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_7b6f029a0160898c16bcaba809565328p2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_7b6f029a0160898c16bcaba809565328p3@Epyc
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_7b6f029a0160898c16bcaba809565328p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_7b6f029a0160898c16bcaba809565328p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_7b6f029a0160898c16bcaba809565328p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_7b6f029a0160898c16bcaba809565328p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_7b6f029a0160898c16bcaba809565328p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_7b6f029a0160898c16bcaba809565328p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_7b6f029a0160898c16bcaba809565328p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_7b6f029a0160898c16bcaba809565328p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_7b6f029a0160898c16bcaba809565328p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_7b6f029a0160898c16bcaba809565328p5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_7b6f029a0160898c16bcaba809565328p7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_7b6f029a0160898c16bcaba809565328p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_7b6f029a0160898c16bcaba809565328p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_7b6f029a0160898c16bcaba809565328p11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_7b6f029a0160898c16bcaba809565328p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_7b6f029a0160898c16bcaba809565328p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_7b6f029a0160898c16bcaba809565328p@chr2:53464168..53464175, +

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