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Difference between revisions of "UBERON:0009856"

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{{UBERON
 
{{UBERON
|id=UBERON:0009856
+
|alt_id=
|name=sac
 
|namespace=
 
|def=
 
|xref=
 
|is_a=UBERON:0000061
 
|synonym="diverticulum" RELATED [];;"pouch" EXACT []
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def=
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0009856
 +
|is_a=UBERON:0000061
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=sac
 +
|namespace=
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym="diverticulum" RELATED [];;"pouch" EXACT []
 +
|union_of=
 +
|xref=
 
}}
 
}}

Revision as of 02:48, 12 September 2014

Name:sac
Synonyms: "diverticulum" RELATED []
"pouch" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000061(anatomical structure)



Children

is a:UBERON:0007499 (epithelial sac),UBERON:0009854 (digestive tract diverticulum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009856 (sac), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.45e-69FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_f663387f6734ca9a11294f6f7c314f40p@chr5:90897694..90897705, +
2.45e-69FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_f663387f6734ca9a11294f6f7c314f40p@chr5:90897694..90897705, +
4.3e-69FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_ec9fd45f634b8f62ab5ee3fe1acf0ed3p@chr19:25169885..25169900, +
4.3e-69FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_ec9fd45f634b8f62ab5ee3fe1acf0ed3p@chr19:25169885..25169900, +
8.55e-68FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_578f8bff4cbcd07b0e5c9bcb7de32233p6@Insc
8.55e-68FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_578f8bff4cbcd07b0e5c9bcb7de32233p6@Insc
2.4e-67FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_9e495edc6454bd5638a4dacb2de408c8p2@uc009nzu.1
2.4e-67FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_9e495edc6454bd5638a4dacb2de408c8p2@uc009nzu.1
1.68e-65FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_affaecee27683dca988ecbebe09b4ca1p5@Bhmt
1.68e-65FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_affaecee27683dca988ecbebe09b4ca1p5@Bhmt
3.44e-65FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_540f8594579ff17237269b0d4f3566cbp@chr1:162917234..162917248, +
3.44e-65FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_540f8594579ff17237269b0d4f3566cbp@chr1:162917234..162917248, +
4.38e-65FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_56ed8d214c795457cfcf0b9f3b156441p1@Rtp3
4.38e-65FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_56ed8d214c795457cfcf0b9f3b156441p1@Rtp3
2.72e-64FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_2af9b905348cbcb7d583ff0e154d7964p@chr7:112744083..112744109, -
2.72e-64FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_2af9b905348cbcb7d583ff0e154d7964p2@Rtp3
2.72e-64FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_2af9b905348cbcb7d583ff0e154d7964p2@Rtp3
2.72e-64FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_2af9b905348cbcb7d583ff0e154d7964p@chr7:112744083..112744109, -
6.61e-64FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_47bd40a7a06a4c5742c3b093d997de57p@chr13:23928766..23928779, +
6.61e-64FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_47bd40a7a06a4c5742c3b093d997de57p@chr13:23928766..23928779, +
7.86e-64FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_a8ff354e7c78f2d638055b2fc5af9301p3@Blvrb
7.86e-64FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_a8ff354e7c78f2d638055b2fc5af9301p3@Blvrb
1.46e-63FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr6:128436166..128436185, -
1.46e-63FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr12:105004018..105004046, -
1.46e-63FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr6:128436166..128436185, -
1.46e-63FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr2:10041210..10041222, -
1.46e-63FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_c9b3d95c1e119cd8060fa01e7619b31bp@chr16:22894900..22894910, +
1.46e-63FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr16:22898981..22898988, -
1.46e-63FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr2:10041210..10041222, -
1.46e-63FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr12:105004018..105004046, -
1.46e-63FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_c9b3d95c1e119cd8060fa01e7619b31bp@chr16:22894900..22894910, +
1.46e-63FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_c9b3d95c1e119cd8060fa01e7619b31bp@chr16:22898981..22898988, -
1.0e-61FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_679f0c21228b449ff9c84206f110d832p@chr1:173155793..173155841, +
1.0e-61FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_679f0c21228b449ff9c84206f110d832p@chr1:173155793..173155841, +
1.17e-61FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_6ffcf89492a559447352992f8b3547f9p@chr17:12584645..12584657, +
1.17e-61FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_6ffcf89492a559447352992f8b3547f9p@chr17:12584645..12584657, +
1.27e-61FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_f7c0d4dea9322547c21ddb1f326aad78p@chr17:12588483..12588503, +
1.27e-61FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_f7c0d4dea9322547c21ddb1f326aad78p@chr17:12588483..12588503, +
1.38e-61FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_907bb2dd695fd75e828a065e907c5417p@chr1:166179426..166179437, +
1.38e-61FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_907bb2dd695fd75e828a065e907c5417p@chr1:166179426..166179437, +
1.57e-61FFCP PHASE1:Mm9::chr8:34917332..34917357,-#_59df93ea7e341294e3905143f59365cdp@chr8:34917332..34917357, -
1.57e-61FFCP PHASE2:Mm9::chr8:34917332..34917357,-#_59df93ea7e341294e3905143f59365cdp@chr8:34917332..34917357, -
3.55e-61FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_7e2b93f2424ef072e22a8054c8b6cac2p@chr19:38191263..38191291, -
3.55e-61FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_7e2b93f2424ef072e22a8054c8b6cac2p@chr19:38191263..38191291, -
7.0e-61FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_0dbbb7d4098f8324711ca709f6c73484p8@Insc
7.0e-61FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_0dbbb7d4098f8324711ca709f6c73484p8@Insc
8.25e-61FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_4f01c982f69dd745dc166bf2514a4f1cp@chr5:90893974..90893978, +
8.25e-61FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_4f01c982f69dd745dc166bf2514a4f1cp@chr5:90893974..90893978, +
1.24e-60FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_0468c54337dd37a402ce1cca9a271f93p1@uc009nzu.1
1.24e-60FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_0468c54337dd37a402ce1cca9a271f93p1@uc009nzu.1
1.35e-60FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_8ad18dbb75f38071eab9baf1c890e8a2p3@Klkb1
1.35e-60FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_8ad18dbb75f38071eab9baf1c890e8a2p3@Klkb1
1.47e-60FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_5fb3f4d5cdae623d497b2ab3ac80120ap@chr3:57191661..57191672, -
1.47e-60FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_5fb3f4d5cdae623d497b2ab3ac80120ap@chr3:57191661..57191672, -
1.59e-60FFCP PHASE1:Mm9::chr3:82814412..82814431,+#_1b384c940cb0e3d540c7b8cd5b7f9a35p@chr3:82814412..82814431, +
1.59e-60FFCP PHASE2:Mm9::chr3:82814412..82814431,+#_1b384c940cb0e3d540c7b8cd5b7f9a35p@chr3:82814412..82814431, +
1.67e-60FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_96d1e46d88c2e756cf00b9c4e1b05025p5@NR1H4
1.67e-60FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_96d1e46d88c2e756cf00b9c4e1b05025p5@NR1H4
1.76e-60FFCP PHASE2:Mm9::chr17:12583153..12583171,+#_472802855254f07a1228e5fbf3d068a4p@chr17:12583153..12583171, +
1.76e-60FFCP PHASE1:Mm9::chr17:12583153..12583171,+#_472802855254f07a1228e5fbf3d068a4p@chr17:12583153..12583171, +
1.93e-60FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_adef1ca2ca8d30b8b367809bb60cd999p58@APOB
1.93e-60FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_adef1ca2ca8d30b8b367809bb60cd999p7@TOP1MT
1.93e-60FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_adef1ca2ca8d30b8b367809bb60cd999p58@APOB
1.93e-60FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_adef1ca2ca8d30b8b367809bb60cd999p7@TOP1MT
2.6e-60FFCP PHASE2:Mm9::chr5:93000570..93000589,+#_ecb652347853c907994944afab0a5babp3@Fam47e
2.6e-60FFCP PHASE1:Mm9::chr5:93000570..93000589,+#_ecb652347853c907994944afab0a5babp3@Fam47e
3.45e-60FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_991834185ba67faa25cd4d18eb46abecp@chr8:92849825..92849837, -
3.45e-60FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_991834185ba67faa25cd4d18eb46abecp@chr3:82835513..82835525, +
3.45e-60FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_991834185ba67faa25cd4d18eb46abecp@chr15:77605636..77605639, +
3.45e-60FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_991834185ba67faa25cd4d18eb46abecp@chr16:22895330..22895339, -
3.45e-60FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_991834185ba67faa25cd4d18eb46abecp@chr16:23449901..23449906, -
3.45e-60FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_991834185ba67faa25cd4d18eb46abecp@chr3:82835513..82835525, +
3.45e-60FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_991834185ba67faa25cd4d18eb46abecp@chr15:77605636..77605639, +
3.45e-60FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_991834185ba67faa25cd4d18eb46abecp@chr16:22895330..22895339, -
3.45e-60FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_991834185ba67faa25cd4d18eb46abecp@chr16:23449901..23449906, -
3.45e-60FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_991834185ba67faa25cd4d18eb46abecp@chr8:92849825..92849837, -
4.1e-60FFCP PHASE1:Mm9::chr16:22896674..22896687,-#_a20e1df8f63ec76cc00ba8c635754c7ep@chr16:22896674..22896687, -
4.1e-60FFCP PHASE2:Mm9::chr16:22896674..22896687,-#_a20e1df8f63ec76cc00ba8c635754c7ep@chr16:22896674..22896687, -
4.47e-60FFCP PHASE2:Mm9::chr17:12577256..12577270,+#_a3bf1540640613720ee9b25c3e776191p@chr17:12577256..12577270, +
4.47e-60FFCP PHASE1:Mm9::chr17:12577256..12577270,+#_a3bf1540640613720ee9b25c3e776191p@chr17:12577256..12577270, +
5.3e-60FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_7b03115fdc30e82245a519a54370fd67p2@Cyp4f15
5.3e-60FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_7b03115fdc30e82245a519a54370fd67p2@Cyp4f15
7.85e-60FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_fb34de1fadf4e1415ba0a053b692f1e3p@chr11:60622345..60622377, -
7.85e-60FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_fb34de1fadf4e1415ba0a053b692f1e3p@chr11:60622345..60622377, -
8.52e-60FFCP PHASE1:Mm9::chr11:46512551..46512577,-#_d6e1e8dfd7db2774ee76c9cab855002dp5@Timd2
8.52e-60FFCP PHASE1:Mm9::chr12:105002005..105002050,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr12:105002005..105002050, -
8.52e-60FFCP PHASE1:Mm9::chr12:105003025..105003036,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr12:105003025..105003036, -
8.52e-60FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_d6e1e8dfd7db2774ee76c9cab855002dp1@Serpina1b
8.52e-60FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr16:22895286..22895297, -
8.52e-60FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_d6e1e8dfd7db2774ee76c9cab855002dp@chr16:22899236..22899246, +
8.52e-60FFCP PHASE1:Mm9::chr16:22899322..22899331,+#_d6e1e8dfd7db2774ee76c9cab855002dp@chr16:22899322..22899331, +
8.52e-60FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr12:105002005..105002050, -
8.52e-60FFCP PHASE2:Mm9::chr12:105003025..105003036,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr12:105003025..105003036, -
8.52e-60FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_d6e1e8dfd7db2774ee76c9cab855002dp1@Serpina1b
8.52e-60FFCP PHASE2:Mm9::chr6:11948347..11948351,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr6:11948347..11948351, -
8.52e-60FFCP PHASE2:Mm9::chr6:128436196..128436215,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr6:128436196..128436215, -
8.52e-60FFCP PHASE2:Mm9::chr6:128438012..128438027,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr6:128438012..128438027, -
8.52e-60FFCP PHASE1:Mm9::chr6:11948347..11948351,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr6:11948347..11948351, -
8.52e-60FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr6:128436196..128436215, -
8.52e-60FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_d6e1e8dfd7db2774ee76c9cab855002dp@chr6:128438012..128438027, -