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Line 13: Line 13:
<script language="javascript" type="text/javascript">
<script language="javascript" type="text/javascript">
$(document).ready(function() {  
$(document).ready(function() {  
// hide-show animation for ucsc genome browser view
$("#ucsc_snap_view").hover(function(){
$("#ucsc_snap_view").hover(function(){
     $(this).stop(true, false).animate({ height: "900px" });
     $(this).stop(true, false).animate({ height: "900px"});
}, function() {
}, function() {
     $(this).stop(true, false).animate({ height: "30px" });
     $(this).stop(true, false).animate({ height: "30px" });
Line 26: Line 27:
== View on UCSC genome browser OSC local mirror ==
== View on UCSC genome browser OSC local mirror ==


<div id="ucsc_snap_view" style="width:850px; height:30px; background-color:#d5eaff; overflow:hidden;">
<div id="ucsc_snap_view" style="width:850px; height:30px; background-color:#f4f4f4; border-style:solid; border-width:1px; border-color:#aaaaaa;  overflow:hidden;">
Mouse over to see Genome browser image, Click image to go to Genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser



Revision as of 14:45, 24 July 2012

motif without matrices Swissregulon:SRY.p1 Swissregulon:HOX(A,B,D)3.p1

doubled top motif tables CNhs10855 & CNhs11062 CNhs11245 & CNhs11183 CNhs11248 & CNhs11185 CNhs11772 & CNhs12996 CNhs11781 & CNhs12997


View on UCSC genome browser OSC local mirror

Mouse over to see Genome browser image, Click image to go to Genome browser

{{#ucsc_link:Hg19::chr11:117695233..117695244,-|https://fantom5-collaboration.gsc.riken.jp/ucsc/}}


{{#sparql: SELECT * WHERE { ?x ?y ?z FILTER regex(?z, "GO") } LIMIT 10 |endpoint=http://go.bio2rdf.org/sparql/ |footer=NO }}







CAGE Peaks (hg19)



    Sample of clicked point:


    sample

    Mm9::chr4:32744082..32744141,+Mm9::chr4:32744082..32744141,+Mm9::chr4:32744159..32744169,+Mm9::chr4:32744159..32744169,+Mm9::chr4:32809978..32809991,+Mm9::chr4:32809978..32809991,+Mm9::chr4:32810017..32810026,+Mm9::chr4:32810017..32810026,+Mm9::chr4:32837666..32837670,+Mm9::chr4:32837666..32837670,+