Personal tools

Template:Coexpression clusters: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 191: Line 191:
== Coexpression_DPI_cluster_scores_median ==
== Coexpression_DPI_cluster_scores_median ==
{{#info: <br>Analyst: }}
{{#info: <br>Analyst: }}
{{#if: {{#pos:{{{coexpression_dpi_cluster_scores_median}}}|,}} |
{{#if: {{#pos:{{{coexpression_dpi_cluster_scores_median}}}|,}} |
<html>
<html>

Revision as of 13:08, 12 September 2012

Full id: {{{full_id}}}


Phase1 CAGE Peaks


Pathway enrichment analysis

Analyst: Emmanuel Dimont


GOStat results on Coexpression cluster

The results for GOStat analysis on co-expressed clusters("All" category). <br>Analyst: Erik Arner


Sample enrichment analysis

The results for enrichment analysis on "All" data of MCL co-expression cluster. That are sorted by ontologies each samples belonging. Original Data <br>Analyst: Hideya Kawaji


TFBS overrepresentation

The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <br>Analyst: Michiel de Hoon


ENCODE TF ChIP-seq peak enrichment analysis

Method: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br>Analyst: Erick Arner

No analysis results for this cluster


Coexpression_DPI_cluster_scores_median

<br>Analyst:

No analysis results for this cluster