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Coexpression cluster:C67

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Full id: C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung



Phase1 CAGE Peaks

Hg19::chr10:102051168..102051211,-p@chr10:102051168..102051211
-
Hg19::chr10:104486253..104486266,+p4@SFXN2
Hg19::chr10:105610418..105610432,-p@chr10:105610418..105610432
-
Hg19::chr10:433965..433992,-p6@DIP2C
Hg19::chr10:79289747..79289795,-p@chr10:79289747..79289795
-
Hg19::chr11:18720316..18720334,+p1@TMEM86A
Hg19::chr11:18720342..18720355,+p3@TMEM86A
Hg19::chr11:59950018..59950037,-p5@MS4A6A
Hg19::chr11:59950609..59950620,-p4@MS4A6A
Hg19::chr11:59950622..59950634,-p3@MS4A6A
Hg19::chr11:59951914..59951931,-p8@MS4A6A
Hg19::chr11:59951955..59951971,-p7@MS4A6A
Hg19::chr11:59952121..59952158,-p13@MS4A6A
Hg19::chr11:60048004..60048017,+p2@MS4A4A
Hg19::chr11:60048026..60048037,+p4@MS4A4A
Hg19::chr11:60048053..60048063,+p6@MS4A4A
Hg19::chr11:60048089..60048100,+p3@MS4A4A
Hg19::chr11:60048131..60048154,+p1@MS4A4A
Hg19::chr11:71927818..71927845,+p1@FOLR2
Hg19::chr11:74862080..74862089,+p7@SLCO2B1
Hg19::chr11:74862100..74862137,+p2@SLCO2B1
Hg19::chr11:74862140..74862159,+p1@SLCO2B1
Hg19::chr11:74873772..74873777,+p@chr11:74873772..74873777
+
Hg19::chr11:76886293..76886345,+p@chr11:76886293..76886345
+
Hg19::chr11:76886346..76886360,+p@chr11:76886346..76886360
+
Hg19::chr11:76886405..76886416,+p@chr11:76886405..76886416
+
Hg19::chr11:914717..914721,-p14@CHID1
Hg19::chr11:914789..914805,-p7@CHID1
Hg19::chr11:915012..915016,-p4@CHID1
Hg19::chr11:933519..933549,+p3@AP2A2
Hg19::chr11:933555..933565,+p7@AP2A2
Hg19::chr12:108733078..108733111,-p1@CMKLR1
Hg19::chr12:111752879..111752896,-p@chr12:111752879..111752896
-
Hg19::chr12:7649491..7649504,-p@chr12:7649491..7649504
-
Hg19::chr12:7649611..7649619,+p@chr12:7649611..7649619
+
Hg19::chr12:7653014..7653018,-p@chr12:7653014..7653018
-
Hg19::chr12:7653927..7653941,-p@chr12:7653927..7653941
-
Hg19::chr12:7653957..7653979,-p@chr12:7653957..7653979
-
Hg19::chr12:7655329..7655334,-p3@CD163
Hg19::chr12:7656133..7656168,-p@chr12:7656133..7656168
-
Hg19::chr12:7656345..7656356,-p2@CD163
Hg19::chr12:7656357..7656379,-p1@CD163
Hg19::chr12:7727849..7727866,-p@chr12:7727849..7727866
-
Hg19::chr12:7727871..7727893,-p@chr12:7727871..7727893
-
Hg19::chr13:49050561..49050578,+p8@RB1
Hg19::chr13:49050580..49050636,+p5@RB1
Hg19::chr14:21250247..21250257,+p9@RNASE6
Hg19::chr14:21269623..21269643,+p@chr14:21269623..21269643
+
Hg19::chr14:21269714..21269754,-p@chr14:21269714..21269754
-
Hg19::chr14:21270021..21270056,+p@chr14:21270021..21270056
+
Hg19::chr14:21270039..21270054,-p8@RNASE1
Hg19::chr14:21270074..21270116,-p5@RNASE1
Hg19::chr14:21270123..21270135,-p6@RNASE1
Hg19::chr14:21270158..21270175,-p9@RNASE1
Hg19::chr14:21270995..21271013,-p1@RNASE1
Hg19::chr14:21271019..21271030,-p3@RNASE1
Hg19::chr14:21271129..21271133,+p@chr14:21271129..21271133
+
Hg19::chr15:21941646..21941653,-p@chr15:21941646..21941653
-
Hg19::chr15:21941695..21941698,-p@chr15:21941695..21941698
-
Hg19::chr15:50405493..50405509,-p9@ATP8B4
Hg19::chr15:50405514..50405546,-p3@ATP8B4
Hg19::chr15:50405560..50405583,-p4@ATP8B4
Hg19::chr15:79288472..79288475,-p@chr15:79288472..79288475
-
Hg19::chr15:97318756..97318792,+p@chr15:97318756..97318792
+
Hg19::chr16:19702589..19702620,+p3@C16orf62
Hg19::chr16:22825475..22825496,+p1@HS3ST2
Hg19::chr16:22853400..22853404,+p@chr16:22853400..22853404
+
Hg19::chr16:22873614..22873618,+p@chr16:22873614..22873618
+
Hg19::chr16:72159246..72159270,-p1@PMFBP1
Hg19::chr17:29281302..29281321,+p6@ADAP2
Hg19::chr17:34391625..34391638,+p1@CCL18
Hg19::chr17:34397827..34397839,+p@chr17:34397827..34397839
+
Hg19::chr17:34397863..34397878,+p@chr17:34397863..34397878
+
Hg19::chr17:34398465..34398476,+p@chr17:34398465..34398476
+
Hg19::chr17:34398488..34398499,+p@chr17:34398488..34398499
+
Hg19::chr17:34398503..34398539,-p@chr17:34398503..34398539
-
Hg19::chr17:34398808..34398833,-p@chr17:34398808..34398833
-
Hg19::chr17:38121772..38121789,+p3@GSDMA
Hg19::chr17:38125787..38125800,+p@chr17:38125787..38125800
+
Hg19::chr17:38128814..38128833,+p@chr17:38128814..38128833
+
Hg19::chr17:66819004..66819024,+p@chr17:66819004..66819024
+
Hg19::chr17:66819028..66819037,+p@chr17:66819028..66819037
+
Hg19::chr17:78261736..78261799,+p2@RNF213
Hg19::chr17:78261803..78261813,+p8@RNF213
Hg19::chr18:6256778..6256791,+p1@uc002knb.2
Hg19::chr19:11687625..11687648,-p@chr19:11687625..11687648
-
Hg19::chr19:11688500..11688523,-p3@ACP5
Hg19::chr19:11688628..11688640,+p@chr19:11688628..11688640
+
Hg19::chr19:4229263..4229321,+p2@EBI3
Hg19::chr19:54761067..54761076,-p3@LILRB5
Hg19::chr19:54761080..54761146,-p1@LILRB5
Hg19::chr19:54761148..54761169,-p2@LILRB5
Hg19::chr19:54846597..54846601,+p@chr19:54846597..54846601
+
Hg19::chr1:112024304..112024309,-p@chr1:112024304..112024309
-
Hg19::chr1:112031415..112031459,-p1@ADORA3
Hg19::chr1:112031479..112031490,-p7@ADORA3
Hg19::chr1:112031517..112031529,-p8@ADORA3
Hg19::chr1:112031531..112031541,-p11@ADORA3
Hg19::chr1:112032329..112032358,-p4@ADORA3
Hg19::chr1:112032365..112032366,-p19@ADORA3
Hg19::chr1:112032375..112032406,-p5@ADORA3
Hg19::chr1:112046217..112046228,-p9@ADORA3
Hg19::chr1:112046243..112046277,-p3@ADORA3
Hg19::chr1:112046289..112046341,-p2@ADORA3
Hg19::chr1:112046476..112046490,-p13@ADORA3
Hg19::chr1:112047652..112047669,-p@chr1:112047652..112047669
-
Hg19::chr1:112047688..112047699,-p@chr1:112047688..112047699
-
Hg19::chr1:153330693..153330704,+p4@S100A9
Hg19::chr1:183774240..183774270,+p1@RGL1
Hg19::chr1:183774285..183774294,+p5@RGL1
Hg19::chr1:183774356..183774374,+p3@RGL1
Hg19::chr1:219632710..219632742,-p@chr1:219632710..219632742
-
Hg19::chr1:223350243..223350247,+p@chr1:223350243..223350247
+
Hg19::chr1:22962948..22962961,+p4@C1QA
Hg19::chr1:22963102..22963132,+p1@C1QA
Hg19::chr1:22963133..22963149,+p2@C1QA
Hg19::chr1:22963158..22963176,+p3@C1QA
Hg19::chr1:22964110..22964132,+p5@C1QA
Hg19::chr1:22965539..22965550,+p@chr1:22965539..22965550
+
Hg19::chr1:22965577..22965594,-p2@CU688829
Hg19::chr1:22965627..22965636,+p@chr1:22965627..22965636
+
Hg19::chr1:22970119..22970135,+p1@C1QC
Hg19::chr1:22970487..22970507,+p3@C1QC
Hg19::chr1:22970524..22970560,+p2@C1QC
Hg19::chr1:22970588..22970599,+p4@C1QC
Hg19::chr1:22973754..22973778,+p@chr1:22973754..22973778
+
Hg19::chr1:22973822..22973834,+p@chr1:22973822..22973834
+
Hg19::chr1:22973902..22973937,+p@chr1:22973902..22973937
+
Hg19::chr1:22973918..22973964,-p1@CU679234
Hg19::chr1:22973960..22973973,+p@chr1:22973960..22973973
+
Hg19::chr1:22973979..22973997,+p@chr1:22973979..22973997
+
Hg19::chr1:22973985..22973997,-p2@CU679234
Hg19::chr1:22973999..22974041,+p@chr1:22973999..22974041
+
Hg19::chr1:22974069..22974089,+p@chr1:22974069..22974089
+
Hg19::chr1:22974092..22974109,+p@chr1:22974092..22974109
+
Hg19::chr1:22974134..22974213,+p@chr1:22974134..22974213
+
Hg19::chr1:22974247..22974259,+p@chr1:22974247..22974259
+
Hg19::chr1:22974264..22974270,+p@chr1:22974264..22974270
+
Hg19::chr1:22974301..22974317,+p@chr1:22974301..22974317
+
Hg19::chr1:22974403..22974423,+p@chr1:22974403..22974423
+
Hg19::chr1:22974446..22974456,+p@chr1:22974446..22974456
+
Hg19::chr1:22974497..22974515,+p@chr1:22974497..22974515
+
Hg19::chr1:22979582..22979590,+p5@C1QB
Hg19::chr1:22979661..22979663,+p8@C1QB
Hg19::chr1:22979676..22979692,+p3@C1QB
Hg19::chr1:22979694..22979772,+p1@C1QB
Hg19::chr1:22985947..22985959,+p16@C1QB
Hg19::chr1:22985967..22985978,+p15@C1QB
Hg19::chr1:22985979..22985996,+p12@C1QB
Hg19::chr1:22986001..22986054,+p4@C1QB
Hg19::chr1:22986068..22986079,+p13@C1QB
Hg19::chr1:22987297..22987325,+p9@C1QB
Hg19::chr1:22987383..22987394,+p10@C1QB
Hg19::chr1:22987400..22987432,+p6@C1QB
Hg19::chr1:22987434..22987553,+p2@C1QB
Hg19::chr1:22987498..22987528,-p@chr1:22987498..22987528
-
Hg19::chr1:22987549..22987612,-p@chr1:22987549..22987612
-
Hg19::chr1:22987557..22987581,+p7@C1QB
Hg19::chr1:22987587..22987601,+p14@C1QB
Hg19::chr1:22987769..22987782,+p11@C1QB
Hg19::chr1:22987795..22987818,-p@chr1:22987795..22987818
-
Hg19::chr1:22987819..22987832,-p@chr1:22987819..22987832
-
Hg19::chr1:24194771..24194851,-p1@FUCA1
Hg19::chr1:78050720..78050734,-p9@ZZZ3
Hg19::chr20:25300539..25300555,-p@chr20:25300539..25300555
-
Hg19::chr20:3287808..3287861,-p@chr20:3287808..3287861
-
Hg19::chr20:3321190..3321215,-p7@C20orf194
Hg19::chr20:3689691..3689692,-p@chr20:3689691..3689692
-
Hg19::chr20:3693196..3693253,-p@chr20:3693196..3693253
-
Hg19::chr20:3693276..3693290,-p@chr20:3693276..3693290
-
Hg19::chr21:45543982..45544017,+p@chr21:45543982..45544017
+
Hg19::chr22:31003100..31003111,+p8@TCN2
Hg19::chr22:31003133..31003138,+p10@TCN2
Hg19::chr22:31003142..31003153,+p6@TCN2
Hg19::chr22:31003154..31003188,+p1@TCN2
Hg19::chr22:31003190..31003208,+p3@TCN2
Hg19::chr22:31003217..31003228,+p9@TCN2
Hg19::chr22:31003229..31003252,+p4@TCN2
Hg19::chr22:31003261..31003302,+p2@TCN2
Hg19::chr22:44568825..44568837,+p12@PARVG
Hg19::chr22:44568847..44568879,+p7@PARVG
Hg19::chr2:113999397..113999413,-p17@PAX8
Hg19::chr2:119726672..119726699,+p@chr2:119726672..119726699
+
Hg19::chr2:119726719..119726744,+p@chr2:119726719..119726744
+
Hg19::chr2:169926030..169926035,+p10@DHRS9
Hg19::chr2:206547765..206547823,+p4@NRP2
Hg19::chr2:218771554..218771570,-p@chr2:218771554..218771570
-
Hg19::chr2:219196764..219196774,+p@chr2:219196764..219196774
+
Hg19::chr2:25873079..25873089,-p23@DTNB
Hg19::chr2:29446678..29446695,-p3@ALK
Hg19::chr2:69732960..69732981,-p@chr2:69732960..69732981
-
Hg19::chr2:70262097..70262104,-p@chr2:70262097..70262104
-
Hg19::chr2:70262106..70262128,-p@chr2:70262106..70262128
-
Hg19::chr2:70262152..70262160,-p@chr2:70262152..70262160
-
Hg19::chr2:99385321..99385328,-p@chr2:99385321..99385328
-
Hg19::chr2:99389379..99389390,-p@chr2:99389379..99389390
-
Hg19::chr3:11349970..11349981,+p8@ATG7
Hg19::chr3:126666514..126666542,+p@chr3:126666514..126666542
+
Hg19::chr3:158537329..158537341,+p5@MFSD1
Hg19::chr3:158537344..158537353,+p18@MFSD1
Hg19::chr3:158537430..158537441,+p6@MFSD1
Hg19::chr3:158537454..158537484,+p3@MFSD1
Hg19::chr3:52514172..52514193,+p4@NISCH
Hg19::chr3:52525071..52525085,+p15@NISCH
Hg19::chr3:52529298..52529302,-p@chr3:52529298..52529302
-
Hg19::chr3:52529346..52529362,+p1@STAB1
Hg19::chr3:52529379..52529390,+p2@STAB1
Hg19::chr3:52529399..52529410,+p3@STAB1
Hg19::chr3:52537033..52537050,+p@chr3:52537033..52537050
+
Hg19::chr3:52537839..52537870,+p@chr3:52537839..52537870
+
Hg19::chr3:52558504..52558511,-p@chr3:52558504..52558511
-
Hg19::chr3:52716193..52716220,-p@chr3:52716193..52716220
-
Hg19::chr3:9151239..9151246,-p@chr3:9151239..9151246
-
Hg19::chr3:9151250..9151261,-p@chr3:9151250..9151261
-
Hg19::chr3:9151271..9151285,-p@chr3:9151271..9151285
-
Hg19::chr3:9151304..9151311,-p@chr3:9151304..9151311
-
Hg19::chr4:124425350..124425365,+p@chr4:124425350..124425365
+
Hg19::chr4:124425394..124425404,+p@chr4:124425394..124425404
+
Hg19::chr4:57570137..57570149,-p@chr4:57570137..57570149
-
Hg19::chr5:149460471..149460494,-p6@CSF1R
Hg19::chr5:150827209..150827231,+p3@SLC36A1
Hg19::chr5:150873498..150873509,+p@chr5:150873498..150873509
+
Hg19::chr5:150873510..150873548,+p@chr5:150873510..150873548
+
Hg19::chr5:150873557..150873562,+p@chr5:150873557..150873562
+
Hg19::chr5:150875782..150875790,+p@chr5:150875782..150875790
+
Hg19::chr5:35195338..35195352,-p6@PRLR
Hg19::chr5:42887498..42887508,-p14@SEPP1
Hg19::chr5:42887509..42887533,-p12@SEPP1
Hg19::chr5:53987781..53987790,+p@chr5:53987781..53987790
+
Hg19::chr5:72251353..72251398,+p6@FCHO2
Hg19::chr5:72251857..72251908,+p1@FCHO2
Hg19::chr5:72252545..72252569,-p@chr5:72252545..72252569
-
Hg19::chr5:76254428..76254466,+p7@CRHBP
Hg19::chr6:109669625..109669629,+p@chr6:109669625..109669629
+
Hg19::chr6:133007791..133007805,-p@chr6:133007791..133007805
-
Hg19::chr6:133119727..133119814,-p1@C6orf192
Hg19::chr6:32918586..32918597,-p@chr6:32918586..32918597
-
Hg19::chr6:56537133..56537166,-p@chr6:56537133..56537166
-
Hg19::chr6:6154374..6154375,-p@chr6:6154374..6154375
-
Hg19::chr6:6222293..6222308,-p4@F13A1
Hg19::chr6:6225026..6225035,-p@chr6:6225026..6225035
-
Hg19::chr6:6311753..6311755,-p@chr6:6311753..6311755
-
Hg19::chr6:6320887..6320902,-p1@F13A1
Hg19::chr6:7052167..7052179,+p@chr6:7052167..7052179
+
Hg19::chr6:7052195..7052268,+p@chr6:7052195..7052268
+
Hg19::chr7:134136504..134136522,-p10@AKR1B1
Hg19::chr7:23286379..23286401,+p1@GPNMB
Hg19::chr7:73240971..73240992,-p@chr7:73240971..73240992
-
Hg19::chr8:19093121..19093137,-p1@ENST00000518417
Hg19::chr8:24241955..24241966,+p3@ADAMDEC1
Hg19::chr8:24241969..24241999,+p2@ADAMDEC1
Hg19::chr8:24242010..24242026,+p1@ADAMDEC1
Hg19::chr8:24256905..24256914,+p@chr8:24256905..24256914
+
Hg19::chr8:24257731..24257740,+p@chr8:24257731..24257740
+
Hg19::chr8:59512733..59512738,-p14@NSMAF
Hg19::chr8:87354945..87355012,+p1@WWP1
Hg19::chr8:87355054..87355061,+p7@WWP1
Hg19::chr8:96207569..96207581,+p@chr8:96207569..96207581
+
Hg19::chr9:114047117..114047127,-p2@ENST00000426204
Hg19::chr9:114047148..114047161,-p1@ENST00000426204
Hg19::chr9:17415302..17415305,+p@chr9:17415302..17415305
+
Hg19::chrX:41548220..41548243,+p2@GPR34
Hg19::chrX:46639989..46640013,-p@chrX:46639989..46640013
-
Hg19::chrX:5644149..5644163,-p1@ENST00000456559
Hg19::chrX:5644164..5644176,-p2@ENST00000456559
Hg19::chrX:65241581..65241584,+p@chrX:65241581..65241584
+
Hg19::chrX:65252487..65252505,-p@chrX:65252487..65252505
-
Hg19::chrX:65253611..65253626,-p5@VSIG4
Hg19::chrX:65259856..65259863,-p4@VSIG4
Hg19::chrX:65259884..65259896,-p2@VSIG4
Hg19::chrX:65259900..65259909,-p3@VSIG4
Hg19::chrX:65259914..65259937,-p1@VSIG4


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

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ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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