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MacroAPE 1083:RFX1 NPC-Rfx1-ChIP-Seq/Homer

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Full Name: RFX1_NPC-Rfx1-ChIP-Seq/Homer

Motif matrix
POACGT
152968515101081
2881536984
319323843379
4183727952800
54072852550563
64353823240
7433974400
83147266118274
93081373043056
10354434434
112512735198
126202280361544
13255795978175
14321117937342

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

RFX1#MA0365.100.0001820170.08664030.1732818GGTTGCCATGGCAAGGTTGCTA+
YY1#MA0095.1-40.009801394.6654616GGTTGCCATGGCAAGCCATC+
ESR1#MA0112.260.0105775.03465114GGTTGCCATGGCAAAGGTCAGGGTGACCTGGGCC-
RIM101#MA0368.1-30.01060655.048717GGTTGCCATGGCAACGCCAAG+
ESR1#MA0112.230.0110955.28121114GGTTGCCATGGCAACCAGGTCACCGTGACCCC+
Sox2#MA0143.110.01353946.44477114GGTTGCCATGGCAACCTTTGTTATGCAAA+
Pou5f1#MA0142.100.01490187.09324114GGTTGCCATGGCAACTTTGTTATGCAAAT+